Query= MSMg01no413_e18.b1 MSMg01no413_e18.b1 CHROMAT_FILE:
MSMg01no413_e18.b1 PHD_FILE: MSMg01no413_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:56 2005
(579 letters)
>mm_chr2_44054128_44055107
Length = 980
Score = 1027 bits (531), Expect = 0.0
Identities = 564/575 (98%), Gaps = 1/575 (0%)
Strand = Plus / Minus
Query: 6 gaattc-cacagggtgcttcactgaactactgtttgagttccatcagccttcccggcttt 64
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct: 590 gaattcacacagggtgcttcactgaactactgtttgagttccatcagcctccccagcttt 531
Query: 65 gtggtaggtgtaacatgacccaattcttaatcttctagtcatccagatcattttgtaaca 124
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 530 gtggtaggtgtaacatgacccaattcttaatcttctagtcatccagattattttgtaaca 471
Query: 125 acattgctattattgtagcattttatgtttgccaggatgctacacgtgaacagttgcaca 184
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 470 acattgctattattgtagcattttatgtttgccaggatgctacatgtgaacagttgtaca 411
Query: 185 gttcaggtgttttagagtcagggggcccttgacctctgctgattctccagcctgccctgc 244
|||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gttcaggtgtattagagtcaaggggcccttgacctctgctgattctccagcctgccctgc 351
Query: 245 acgtgtgtagacagttctactcgggctgttctggatttttgcactttcagcatcttatgt 304
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 350 acgtgtgtagacagttctactcccgctgttctggatttttgcactttcagcatcttatgt 291
Query: 305 caacagactgtctctctactagataaaaatacatagatgacgattcttcactcgttttat 364
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 290 caacagactgtctctctactagataaaaatacataaatgacgattcttcactcgttttat 231
Query: 365 atttttaaaactctgacagctagagaatataaattaaaatatttaagcttaaaaattgta 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 atttttaaaactctgacagctagagaatataaattaaaatatttaagcttaaaaattgta 171
Query: 425 aaaatttaaatttatcttgaaaacttttacttaatttggaaaaatagcaagccctagttg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 aaaatttaaatttatcttgaaaacttttacttaatttggaaaaatagcaagccctagttg 111
Query: 485 aaaatgttgtaagttgtaggagaaactgagttttgtaagaagcaaaatacttgaaactaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 aaaatgttgtaagttgtaggagaaactgagttttgtaagaagcaaaatacttgaaactaa 51
Query: 545 tagcagatatttaattgtatattagtaaacactat 579
|||||||||||||||||||||||||||||||||||
Sbjct: 50 tagcagatatttaattgtatattagtaaacactat 16
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 980
Length adjustment: 10
Effective length of query: 569
Effective length of database: 970
Effective search space: 551930
Effective search space used: 551930
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no413_e18.g1 MSMg01no413_e18.g1 CHROMAT_FILE:
MSMg01no413_e18.g1 PHD_FILE: MSMg01no413_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:30:56 2005
(436 letters)
>mm_chr2_43885912_43886747
Length = 836
Score = 833 bits (431), Expect = 0.0
Identities = 434/435 (99%)
Strand = Plus / Plus
Query: 1 cttagttgagatggagaactagccatgacaaataatttcaatgtcccattgaacagactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttagttgagatggagaactagccatgacaaataatttcaatgtcccattgaacagactc 260
Query: 61 catattccctgatgagtgtattccactgatcacttccggttcgcatgcctcactttcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catattccctgatgagtgtattccactgatcacttccggttcgcatgcctcactttcagg 320
Query: 121 acacttcctacattacttttgattttcaagcacttgcccaagtttttccttaaaatcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acacttcctacattacttttgattttcaagcacttgcccaagtttttccttaaaatcaca 380
Query: 181 gggccccctatggaggagctagagaaagtaaccaaggagctaaagggatctgcaacccta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggccccctatggaggagctagagaaagtaaccaaggagctaaagggatctgcaacccta 440
Query: 241 taggtggaacatcaacatgaactaaccagtacctccccaaccccccgagctcatgtctct 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taggtggaacaacaacatgaactaaccagtacctccccaaccccccgagctcatgtctct 500
Query: 301 acctgcatatgaatcagaagatggcctagtcggccatcagtggaaaaaggggcccattgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acctgcatatgaatcagaagatggcctagtcggccatcagtggaaaaaggggcccattgg 560
Query: 361 tcgtgcaaactttatatgcctcagtacaggggaacgccagggccaagaagtgggactggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcgtgcaaactttatatgcctcagtacaggggaacgccagggccaagaagtgggactggg 620
Query: 421 tgggggagcgtgtgg 435
|||||||||||||||
Sbjct: 621 tgggggagcgtgtgg 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
