Query= MSMg01no414_b22.b1 MSMg01no414_b22.b1 CHROMAT_FILE:
MSMg01no414_b22.b1 PHD_FILE: MSMg01no414_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:01 2005
(581 letters)
>mm_chr2_10262600_10263577
Length = 978
Score = 928 bits (480), Expect = 0.0
Identities = 546/574 (95%), Gaps = 13/574 (2%)
Strand = Plus / Plus
Query: 9 tccacactatgtctttt-acatacattcctttcccctcacggggttatgtgtgtacacgt 67
||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 209 tccacactatgccttttcacatacattcctttcccctcacggggtta--tgtgtacac-- 264
Query: 68 acgtagacacacacacacatgcacactaagtaaaaggtactttttaaaaaaagaagtaca 127
|| | ||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 acacacacacacacacacacacacactaagtaaaaggtactttttaaaaaatgaagtaca 324
Query: 128 aaaacatggaatttttgagagtagaaatatttaaaacaaatgccacattaaacaattaaa 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaaacatggaatttttgagagtagaaatatttaaaacaaatgccacattaaacaattaaa 384
Query: 188 gtaggcatagagtttaaaataactaactttctattctaggtgattggacgagttattttt 247
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 gtaggcatagagtttaaaataactaactttctattctaggtgattggatgagttattttt 444
Query: 248 aaattacttgtctgctcctaccatggccactgttctctttgcagtgtgataaataaattt 307
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 aaattacttgtctgctcctaccacggccactgttctctttgcagtgtgataaataaattt 504
Query: 308 gctttctttctattaaaaacacattgttttaaaacgttacttactctgtagtatggagag 367
|||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct: 505 gctttctttctattaaaaacgcattgttttcaaacgttacttactctgtagtatggagag 564
Query: 368 ttcctgaaagcgacggttctggttctcgcgacaagaccggggaagcggggaagcgcttgg 427
||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 565 ttcctgaaagcgacggttctggttctcgcgacaagaccggggaagcg--------cttgg 616
Query: 428 agggttgagtccacagatgctaggcgtgcgaacagtttgtcctgcccctggatccacctt 487
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 agggtagagtccacagatgctaggcgtgcgaacagtttgtcctgcccctggatccacctt 676
Query: 488 agccttgaagttcgcctcacttacgagtcatctgacttgtttgttgaagggagtatttgt 547
||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 677 agccttggagttcacctcacttacgggtcatctgacttgtttgttgaagggagtatttgt 736
Query: 548 cttctgaattttccctcaggctacggaagaaaat 581
||||||||||||||||||||||||||||||||||
Sbjct: 737 cttctgaattttccctcaggctacggaagaaaat 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 978
Length adjustment: 10
Effective length of query: 571
Effective length of database: 968
Effective search space: 552728
Effective search space used: 552728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_b22.g1 MSMg01no414_b22.g1 CHROMAT_FILE:
MSMg01no414_b22.g1 PHD_FILE: MSMg01no414_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:01 2005
(451 letters)
>mm_chr2_10435992_10436842
Length = 851
Score = 847 bits (438), Expect = 0.0
Identities = 446/451 (98%), Gaps = 4/451 (0%)
Strand = Plus / Minus
Query: 1 aattcctctgtgtgtgagagtgtatgtgcttgcatttgtgtgtgtgtgtgcgtgcgtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aattcctctgtgtgtgagagtgtatgtgcttgcatttgtgtgtgtgtgtgcgtgcgtatg 574
Query: 61 atatatatattcacatacacacaagcacatgcacacacaaatatacacacatggacatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 atatatatattcacatacacacaagcacatgcacacacaaatatacacacatggacatac 514
Query: 121 atggctgagaatcacatgaatcacaggctgatcttaaaatcatcatgaagttaagcatga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 atggctgagaatcacatgaatcacaggctgatcttaaaatcatcatgaagttaagcatga 454
Query: 181 atttgaactcctaaaactcctgattccagcatacattttgacctggagagtgagatcacg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 atttgaactcctaaaactcctgattccagcatacattttgacctggagagtgagatcacg 394
Query: 241 cactgtcccagaactgcataatctctaaaactctaagtgacatatcattcaaatggatcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 cactgtcccagaactgcataatctctaaaactctaagtgacatatcattcaaatggatcg 334
Query: 301 atgagtgtcatttgtgtgtgtgtgtgtgtgtgtgccgcatgtgtgtgcatgtgtctgtat 360
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 atgagtgtcatt----tgtgtgtgtgtgtgtgtgccgcatgtgtgtgcatgtgtctgtat 278
Query: 361 atgcnaaatcatatacatacatccacatgcacacacacgaaaacacacatcgacataaat 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 atgcaaaatcatatacatacatccacatgcacacacacgaaaacacacatcgacataaat 218
Query: 421 gggtggcatcacatgaatgatctataactga 451
|||||||||||||||||||||||||||||||
Sbjct: 217 gggtggcatcacatgaatgatctataactga 187
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 67
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
