Query= MSMg01no414_e13.b1 MSMg01no414_e13.b1 CHROMAT_FILE:
MSMg01no414_e13.b1 PHD_FILE: MSMg01no414_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:16 2005
(470 letters)
>mm_chr2_118947185_118948054
Length = 870
Score = 847 bits (438), Expect = 0.0
Identities = 462/470 (98%)
Strand = Plus / Plus
Query: 1 cagagaagtgtggacagtcggttcttcagggccctggctgcctgattctctagttttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagagaagtgtggacagtcggttcttcagggccctggctgcctgattctctagttttgtt 260
Query: 61 tttgcaaggtttcttagtttaggtttttctttgtttgtttgttttgagtgggctgggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgcaaggtttcttagtttaggtttttctttgtttgtttgttttgagtgggctgggttt 320
Query: 121 ttgttttgtttttgtttccctggcttgtgtcaacagatgtaagattcaggctgaattgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgttttgtttttgtttccctggcttgtgtcaacagatgtaagattcaggctgaattgaa 380
Query: 181 tgtattttggattataggaatgtcagcttctcatagacacttcattacagttggaaggtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtattttggattataggaatgtcagcttctcatagacacttcattacagttggaaggtg 440
Query: 241 gtgaccctgatttatctttttgaagtgttcctagaactccctgtatatttctttgtagca 300
|||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgaccctgaggaagctaggtgaagtgttcctagaactccctgtatatttctttgtagca 500
Query: 301 ttctacaaatgtaacagttttaaaataaagacttttttttaattattttttagtggtttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctacaaatgtaacagttttaaaataaagacttttttttaattattttttagtggtttt 560
Query: 361 agaaattgattcaggagctaatggtatacttaaattccccgtcttctgtcctgtactcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaaattgattcaggagctaatggtatacttaaattccccgtcttctgtcctgtactcca 620
Query: 421 cctgccaggacttgagatcataggcattagccagtcattctggctctgat 470
|||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 cctgccaggacttgagatcataggcattagtcagtcattctggctctgat 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 870
Length adjustment: 10
Effective length of query: 460
Effective length of database: 860
Effective search space: 395600
Effective search space used: 395600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_e13.g1 MSMg01no414_e13.g1 CHROMAT_FILE:
MSMg01no414_e13.g1 PHD_FILE: MSMg01no414_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:16 2005
(250 letters)
>mm_chr2_119109577_119110226
Length = 650
Score = 476 bits (246), Expect = e-139
Identities = 249/250 (99%), Gaps = 1/250 (0%)
Strand = Plus / Minus
Query: 1 cttttcatctggttcacagaagacaaacctctgaaagttactttacctgacaaatctgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cttttcatctggttcacagaagacaaacctctgaaagttactttacctgacaaatctgtt 307
Query: 61 tgatagttctcaggcagagtcttgacctcatctgagaaaaccagctttggccaagaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgatagttctcaggcagagtcttgacctcatctgagaaaaccagctttggccaagaagga 247
Query: 121 gctgctgtgagagtctactctcgaagagtactctctaaacacttccaaaaaaaaaaaaaa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 246 gctgctgtgagagtctactctcgaagagtactctctaaacacttcc-aaaaaaaaaaaaa 188
Query: 181 aaaaaaatgagctcatcctacagtgtcaggaaataggcagagttttattttctcattgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 aaaaaaatgagctcatcctacagtgtcaggaaataggcagagttttattttctcattgaa 128
Query: 241 gggagagcct 250
||||||||||
Sbjct: 127 gggagagcct 118
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
