Query= MSMg01no414_e23.b1 MSMg01no414_e23.b1 CHROMAT_FILE:
MSMg01no414_e23.b1 PHD_FILE: MSMg01no414_e23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:18 2005
(518 letters)
>mm_chr2_112285037_112285954
Length = 918
Score = 932 bits (482), Expect = 0.0
Identities = 506/514 (98%)
Strand = Plus / Minus
Query: 5 gaattcctccagtgttcacacaggatgctctctaaacaaagtaccagcagtgtgctgtga 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaattcctccagtgttcagacaggatgctctctaaacaaagtaccagcagtgtgctgtga 659
Query: 65 attgctcatcattttaatagctgttttcttgtttttgaattattaaatactgttggcata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 attgctcatcattttaatagctgttttcttgtttttgaattattaaatactgttggcata 599
Query: 125 ttttatctgccattaccatgggacttagcccagaaagtttaatgatacaataaaatatat 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 598 ttttatctgccattaccatgggacttagcccagaaaatttaatgatacaataaaatatat 539
Query: 185 atttctccatattacatttatcaaatttaaggcagatactactgaaattcagatgtcaca 244
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 538 atttctccatgttacatttatcatatttaaggcagatactactgaaattcagatgtcaca 479
Query: 245 ccttcaaccccttattaataaagcatatacattcaaagaatatatatgtgtatgaatata 304
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ccttcagccccttattaataaagcatatacattcaaagaatatatatgtgtatgaatata 419
Query: 305 tacatatatgttcttccatgggcttaatttttggttgtcagggcatggatataatagttc 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tacatatatgttcttccatgggcttaatttttggttgtcagggcatggatataatagttt 359
Query: 365 atagtcttcttttataaagtaaacacagatgactcatgtgtttctctcagactttttttg 424
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtagtcttcttttataaaataaacacagatgactcatgtgtttctctcagactttttttg 299
Query: 425 aaatctgaagagttcatttgaatgttgacgttcattactgctggcaggagactaactaaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aaatctgaagagttcatttgaatgttgacgttcattactgctggcaggagactaactaaa 239
Query: 485 accagagatgaaggaggtggtggcaaaatgcaaa 518
||||||||||||||||||||||||||||||||||
Sbjct: 238 accagagatgaaggaggtggtggcaaaatgcaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_e23.g1 MSMg01no414_e23.g1 CHROMAT_FILE:
MSMg01no414_e23.g1 PHD_FILE: MSMg01no414_e23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:18 2005
(455 letters)
>mm_chr2_112117531_112118385
Length = 855
Score = 841 bits (435), Expect = 0.0
Identities = 450/459 (98%), Gaps = 8/459 (1%)
Strand = Plus / Plus
Query: 1 aattctgcaagaataagtgctcttaaccattgagccatcttcccagcccattaatttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattctgcaagaataagtgctcttaaccattgagccatcttcccagcccattaatttgat 260
Query: 61 attttaaactattattcagtctctcagtagcagataaaaggggttgctgaatatgataaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attttaaactattattcagtctctcagtagcagataaaaggggttgctgaatatgataaa 320
Query: 121 tagggaaggtgtaggcacatcttttattggagaatgagaatatacttagcagactccagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagggaaggtgtaggcacatcttttattggagaatgagaatatacttagcagactccagc 380
Query: 181 aatagcagtaactctaaatttaagtaatgaacgactcattatcttctgtaagatgtttac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatagcagtaactctaaatttaagtaatgaacgactcattatcttctgtaagatgtttac 440
Query: 241 agaattctattttt----cagccattcagaatatgcagatagtgctgggtcatattgcct 296
|||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaattctat----agaacagtcattcagaatatgcagatagtgctgggtcatattgcct 496
Query: 297 atcagaggaagtaaggtaagaaattgaaattttagaagcttgcatggtagcttaatagaa 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 atcagaggaagtaaggtaagaaattgaaattttagaagcttgcatggtagcttaatagaa 556
Query: 357 caatcttttatctgctgaatttcatgatttaaaaaattgggatttatgccaggcagtggt 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caatcttttatctgctgaatttcatgatttaaaaaattgggatttatgccaggcagtggt 616
Query: 417 ggtgtgttcctttaatgccagcacttgggaggcagaggc 455
|||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggtgtgttcctttaatgccagcacttgggaggcagaggc 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
