Query= MSMg01no414_g06.b1 MSMg01no414_g06.b1 CHROMAT_FILE:
MSMg01no414_g06.b1 PHD_FILE: MSMg01no414_g06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:25 2005
(418 letters)
>mm_chr2_164792201_164793017
Length = 817
Score = 770 bits (398), Expect = 0.0
Identities = 413/418 (98%), Gaps = 1/418 (0%)
Strand = Plus / Plus
Query: 1 tgcctaggcagtcattttctctcttgggtgcttagtttttttgtttttgtttttttcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctaggcagtcattttctctcttgggtgcttagtttttttgtttttgtttttttcatt 260
Query: 61 tacaaaatgaaagctatacgttagataagatgaacagttctgtcctacaattctccaggg 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacgaaatgaaagctatacgttagataagatgaacagttctgtcctacaattctccaggg 320
Query: 121 atttttgaggactcaagctgggaaccagggtgactgtatagctatttcctctttccattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttttgaggactcaagctgggaaccagggtgactgtatagctatttcctctttccattg 380
Query: 181 ctagtatgtttagatctagatgcaaagggtctaaacctcaaatgtcactttctgaagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctagtatgtttagatctagatgcaaagggtctaaacctcaaatgtcactttctgaagcat 440
Query: 241 ctccaccattggctcatgtctggcttcggggtcccagggtaatcaagctcctgggggggc 300
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctccaccattggcccaagtctggcttcggggtcccagggtaatcaagctcctgggggggg 500
Query: 301 ctgctggtttcagaagaggaggacaggagagcatgtccggcctggaagcctcagaaagca 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 -tgctggtttcagaagaggaggacaggagagcatgtccggcctggaagcctcagaaagca 559
Query: 361 atcctggattagaggattagacattcccgccccaggagaaaatctggtccccaaccgg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atcctggattagaggattagacattcccgccccaggagaaaatctggtccccaaccgg 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 817
Length adjustment: 9
Effective length of query: 409
Effective length of database: 808
Effective search space: 330472
Effective search space used: 330472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_g06.g1 MSMg01no414_g06.g1 CHROMAT_FILE:
MSMg01no414_g06.g1 PHD_FILE: MSMg01no414_g06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:25 2005
(251 letters)
>mm_chr2_164972678_164973328
Length = 651
Score = 449 bits (232), Expect = e-131
Identities = 244/248 (98%)
Strand = Plus / Minus
Query: 1 acttgtttgtgattgtccagtgtgggaatacgcatgtgagagaggtgtgaagtgtctgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 acttgtttgtgattgtccagtgtgggaatacgcatgtgagagaggtgtgaagtgtctgta 277
Query: 61 ttcaagtgtacagtgactgatggactctgaaccacccaccttagttaccaaggcaatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttcaagtgtacagtgactgatggactctgaaccacccaccttagttaccaaggcaatcta 217
Query: 121 tacaaggaaaacatttagccaggcatggtggtgcacactgttaatcccagcactcaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 tacaaggaaaacatttagccaggcatggtggtgcacactgttaatcccagcactcaggag 157
Query: 181 gtttatgcacatgcatttctgagtttgaggccagtatgatctacatagtgagttccaggg 240
| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gcagaggcacatgcatttctgagtttgaggccagtatgatctacatagtgagttccaggg 97
Query: 241 caaccatg 248
||||||||
Sbjct: 96 caaccatg 89
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
