NNNNTTTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAGAGATTTTAAATGCATCTGTGGCTTACATCTTCAGAGA
TATGAAGTTGAACTTTTACTTCTGAGGTTATAAGTGGATAGTAAAGGAAA
TTCTACTTTGAAAATTCTTATAGTGTCTGAATTTTGCATAAAAGTTACAT
TATTTAGATAAAGCATGAAAAGAATATATAAAAATTACGGAGAGTATAAA
TATTGTAGTTGTTTTATTTTTTCCTTTCTTTTCTTTTCTTTTTGATAAAG
AATCAGTTATCTCACTCAGAAATTTTTCAGTATCTTCATGTATTTTGTCT
CAATTTGTTATCTATACTTTCTACGTAATGACTGAATCTAAATGGCATTT
AACATCATATATATTTATGTAGCTCTGCTTATAAATCCATGGGAAACAAT
AACAATGTTCAAATTATAAGCAGAAAGTAGCTTATGGCTGAACACTTCAA
TAAATATATTCCTTTAACTTACTGAATCAAGTGTATTACTTATAACAGTG
TATATTATTGAAAATATCATTTGGGATAGAGGTTACCATAAAAATATAAC
TGAAACCATTTTTTCAATTATTCCGAAAAAAAATTTTCTTGGAAATAAAA
AAAGCTAATTTTAAAACATAGGCAATTCTTCTTTTTGCTTATAATTAAGA
TTGGAGAAATTTTTTCTTGTATGGGGAAAATGGTTTGATTCTTATCCCCC
CCCAAAATTACCCCTTTATTTTGGTTTGCGCA

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGATTAGTTCTATACCCT
ATTTTTTGATTGGGTTGTTTGATTTCTTTTTCTTTTTCTTTCTTTTTTTT
TTTTTTTTGGTGGTTAGCTTCATAAGTTCTTTATATATTTTGGATATTAG
CCCTCTATTGGATGTTGGTTTAGTAAAGATTTCTTCCCAATCTGTAGGTT
GCTAATTTGCCTTATTGGCTATATCTTTTCCCTTACAGAAGCTTTCCAGT
TTCATGAGGTCCTATTTATCAATTCTTGATCTTATTGCATGAACCATTGG
AGTTCTGTTTAGAAAATTTCCCCCTGTGTCAATGAGTTCAAGGCTCTTTC
ACACTTTCTCTTCTATTAAAGTCAGTGTATTTGGTTTTATGTTGAAGTCC
TTGATCCACTTGGACTTGAGCTTGTGTAAGGGACAAATATGGGGCTATAT
TCCTTTTTTCTACTATTTTTAGGCCGGTAGACCAGCAAAATTTGTTGAAG
ATGCTTTCCTTTTTTCAATAAAAAAAGTTGGGCGTCTTGGCCAAGATTAT
TGGTCTCTAAAGGTTTGATTTATTTTCTGGCTTTCTCTTCTTTTCTTTCG
TAAACCATGTCGCGCATCGTTTTCATTATCTGGCGCGTTGTTATATCTAT
GTGTGGGGCGAAGCTACTTGCGTCCTCTCTCAAGATCGTCTTCTCTCTCC
TTCTTTTTCTTTGATCCAATACTTACCTCCCCCTCTT

Query= MSMg01no414_g22.b1 MSMg01no414_g22.b1 CHROMAT_FILE:
MSMg01no414_g22.b1 PHD_FILE: MSMg01no414_g22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:28 2005
         (495 letters)



>mm_chr2_47553347_47554241
          Length = 895

 Score =  942 bits (487), Expect = 0.0
 Identities = 492/495 (99%), Gaps = 3/495 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcagagattttaaatgcatctgtggcttacatcttcagagatatgaagttgaact 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggaattcagagattttaaatgcatctgtggcttacatcttcagagatatgaagttgaact 260

                                                                       
Query: 64  tttacttctgaggttataagtggatagtaaaggaaattctactttgaaaattcttatagt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttacttctgaggttataagtggatagtaaaggaaattctactttgaaaattcttatagt 320

                                                                       
Query: 124 gtctgaattttgcataaaagttacattatttagataaagcatgaaaagaatatataaaaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgaattttgcataaaagttacattatttagataaagcatgaaaagaatatataaaaa 380

                                                                       
Query: 184 ttacggagagtataaatattgtagttgttttattttttcctttctt---ttcttttcttt 240
           ||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||
Sbjct: 381 ttacggagagtataaatattgtagttgttttattttttcctttcttcttttcttttcttt 440

                                                                       
Query: 241 ttgataaagaatcagttatctcactcagaaatttttcagtatcttcatgtattttgtctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttgataaagaatcagttatctcactcagaaatttttcagtatcttcatgtattttgtctc 500

                                                                       
Query: 301 aatttgttatctatactttctacgtaatgactgaatctaaatggcatttaacatcatata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatttgttatctatactttctacgtaatgactgaatctaaatggcatttaacatcatata 560

                                                                       
Query: 361 tatttatgtagctctgcttataaatccatgggaaacaataacaatgttcaaattataagc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tatttatgtagctctgcttataaatccatgggaaacaataacaatgttcaaattataagc 620

                                                                       
Query: 421 agaaagtagcttatggctgaacacttcaataaatatattcctttaacttactgaatcaag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agaaagtagcttatggctgaacacttcaataaatatattcctttaacttactgaatcaag 680

                          
Query: 481 tgtattacttataac 495
           |||||||||||||||
Sbjct: 681 tgtattacttataac 695


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 495
Length of database: 895
Length adjustment: 10
Effective length of query: 485
Effective length of database: 885
Effective search space:   429225
Effective search space used:   429225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)