Query= MSMg01no414_j17.b1 MSMg01no414_j17.b1 CHROMAT_FILE:
MSMg01no414_j17.b1 PHD_FILE: MSMg01no414_j17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:42 2005
(521 letters)
>mm_chr2_124526995_124527915
Length = 921
Score = 658 bits (340), Expect = 0.0
Identities = 381/398 (95%), Gaps = 6/398 (1%)
Strand = Plus / Minus
Query: 5 gaattccaaggctttgatacttatatcttgtgcccactgg------ccctgcatgaccaa 58
||||||||||||| || ||||||||||||||||||||||| ||||||||||||||
Sbjct: 451 gaattccaaggctctggtacttatatcttgtgcccactggccttcaccctgcatgaccaa 392
Query: 59 ggaatgtgaacactttgactggtttcattcacaaggcctcactgtttcagctgtgaaggg 118
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ggaacgtgaacactttgactggtttcattcacaaggcctcactgtttcagctgtgaaggg 332
Query: 119 ggtgatttctcattagtggttggaacaatctcctccataaaaactgggtattgtttttag 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ggtgatttctcattagtggttggaacaatctcctccataaaaactgggtattgtttttaa 272
Query: 179 ataggttttaaaaggctggtgattttaaaatggctcagtgggcagaggtcctggtgcaca 238
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct: 271 ataggttttaaaaggctggtgattttaaaatggctcagcgggcagaggtcctggtgctca 212
Query: 239 ggcaccgtgatatgagttcaatctctgaatcccagaaggtgatataaaagaaccaatttc 298
|||||||||||||||||||||||||||||||||||||||||| | ||||||||| | |||
Sbjct: 211 ggcaccgtgatatgagttcaatctctgaatcccagaaggtgacagaaaagaacccacttc 152
Query: 299 tcagagttgttctctgacctacacaagtgcacaccttggcatatatgctcctgtacttgt 358
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 151 tcagagttgttctctgacctacacatgtgcacaccttggcatatatgctcctgtacttgt 92
Query: 359 gtgtatgtataaactatacatactacacacacacacac 396
||||||||||||||||||||||||||||||||||||||
Sbjct: 91 gtgtatgtataaactatacatactacacacacacacac 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 921
Length adjustment: 10
Effective length of query: 511
Effective length of database: 911
Effective search space: 465521
Effective search space used: 465521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_j17.g1 MSMg01no414_j17.g1 CHROMAT_FILE:
MSMg01no414_j17.g1 PHD_FILE: MSMg01no414_j17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:42 2005
(249 letters)
>mm_chr2_124385671_124386319
Length = 649
Score = 480 bits (248), Expect = e-140
Identities = 248/248 (100%)
Strand = Plus / Plus
Query: 1 gtatctggtcctgttgccaaatatagaatatgtacaggaactcacgaacataactggaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtatctggtcctgttgccaaatatagaatatgtacaggaactcacgaacataactggaac 260
Query: 61 catccaagagctatgcccagaaacaggaaggaaaccatgccatactggaataaaggcatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catccaagagctatgcccagaaacaggaaggaaaccatgccatactggaataaaggcatg 320
Query: 121 gggggacccacaaaagaaagcaaccatggccacagttttagggatcatagaaaatgaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggggacccacaaaagaaagcaaccatggccacagttttagggatcatagaaaatgaagc 380
Query: 181 catgattggaataccgaataaagcaatgtacttgagggccccatgtacaaaacttgggtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgattggaataccgaataaagcaatgtacttgagggccccatgtacaaaacttgggtt 440
Query: 241 gataaggc 248
||||||||
Sbjct: 441 gataaggc 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
