TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCCAAACATCTCACAGTTGCAAATATGATCTACAGCTGACAAAAC
CATGTGATTGGGTTATATATATATCCAATTTTTTATACAGCAAGTAAGTT
ATAGCATAGCATCTAGGCCATCTAGCCCCAAAGCCAAATATAAAAATAGT
TTCAGTACATCAACTCTAACTAAAGAAAAGGAGGAATGAAGGTGACATAT
AACAAGTGCCTATTAATGTCAGGAAGAGGTTGTTAAGTAGCTTTTTGTAG
CAGATCTTGGTCAGTCTTTACACAGTCTTGTCACATGGATGTTATAATTA
TAAAGACCCAGAGTTAATATAGTATCCAAAATCACACATTATGGAGAAAG
CAGGACAAGATCTCATAGCATCAGCTTATGTTTTTGTATAACCCGTAAGT
ACTTTGAGCTTTACAAATCACATGAGGACTGGCGTGTATGTTTCTGTTTC
TTCGCTTCACAGCCAATTGGATTTTACCACCCTTGAAAAATGCAACATTT
GTTTTGATCTTCATGACTGGATGTGACCCAAAGATAGTGATTTACAGATT
ATTCAAAGCCTCCGTCTTTTGAGAATACGGGGAATAGATAATANTGGCCA
GACCGAAGACTTGATTTCAATTTAAATCTGAGTCCCTCCCCTAATAGCTA
ATATTTAATGAGGAAGTTACAAAGTGTCCGCCCATGGGGTAAAATGTTTC
CCATTATTTATCTTACACCTGGCCCCTGGGAAAN

CGATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXTTTTCTGAAATTCCACCTGAGGAATACCGAATGGCTGAGAAG
CACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAA
AACAACACTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAA
ATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGAGGAACACTC
CTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGT
CTGGTGGTTCCTCATATAATTGTACACAGTACTACCAGAGGATCCCACAA
TACCTCTTCTGGGCATATATCCAGAAGATGTTCTAACCAGTAAGAAGGAC
ACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCTAGAAGCTG
GAAAGAACCCAGATGCCCCTCAACAGAGGAATGAATACAGAAAATGTGGT
ACATTTACACAATGGAGTACTACTCAGCTCTGAGAGATCCCCTCATAATT
TCCCCAAAGCGTAACCATGTCGCGAATAAATTTTGAGCTAGTAGGTTTGC
AGCCCCCAGTAAGTCCTCCCCTTGTTATTGTGTAGTCTTAATGCTGGCAA
AATCTCCATGCTTTATTTTACTGTTTAGAATAACGTATTTAATTCCTGTA
TGTGCTACTCTAGTAATTGTCTTGTTTCACACCTTGCTTTCTGATTACTT
ATTCCTTCTCTATTTCTTTN

Query= MSMg01no414_n12.b1 MSMg01no414_n12.b1 CHROMAT_FILE:
MSMg01no414_n12.b1 PHD_FILE: MSMg01no414_n12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:01 2005
         (525 letters)



>mm_chr2_48257007_48257931
          Length = 925

 Score =  984 bits (509), Expect = 0.0
 Identities = 518/521 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccaaacatctcacagttgcaaatatgatctacagctgacaaaaccatgtgattgg 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaacatcacacagttgcaaatatgatctacagctgacaaaaccatgtgattgg 264

                                                                       
Query: 65  gttatatatatatccaattttttatacagcaagtaagttatagcatagcatctaggccat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttatatatatatccaattttttatacagcaagtaagttatagcatagcatctaggccat 324

                                                                       
Query: 125 ctagccccaaagccaaatataaaaatagtttcagtacatcaactctaactaaagaaaagg 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctagccccaaagccaaatataaaaatagtttcagtacatcaactctaactaaagaaaagg 384

                                                                       
Query: 185 aggaatgaaggtgacatataacaagtgcctattaatgtcaggaagaggttgttaagtagc 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggaatgaaggtgacatataacaagtgcctattaatgtcaggaagaggttgttaagtagc 444

                                                                       
Query: 245 tttttgtagcagatcttggtcagtctttacacagtcttgtcacatggatgttataattat 304
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 445 tttttgtagcagatcttggtcagtctttacacagccttgtcacatggatgttataattat 504

                                                                       
Query: 305 aaagacccagagttaatatagtatccaaaatcacacattatggagaaagcaggacaagat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagacccagagttaatatagtatccaaaatcacacattatggagaaagcaggacaagat 564

                                                                       
Query: 365 ctcatagcatcagcttatgtttttgtataacccgtaagtactttgagctttacaaatcac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctcatagcatcagcttatgtttttgtataacccgtaagtactttgagctttacaaatcac 624

                                                                       
Query: 425 atgaggactggcgtgtatgtttctgtttcttcgcttcacagccaattggattttaccacc 484
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 625 atgaggactggcgtgtatgtttctgtttcttcccttcacagccaattggattttaccacc 684

                                                    
Query: 485 cttgaaaaatgcaacatttgttttgatcttcatgactggat 525
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cttgaaaaatgcaacatttgttttgatcttcatgactggat 725


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space:   471225
Effective search space used:   471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)