Query= MSMg01no415_a07.b1 MSMg01no415_a07.b1 CHROMAT_FILE:
MSMg01no415_a07.b1 PHD_FILE: MSMg01no415_a07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:16 2005
(415 letters)
>mm_chr2_130657757_130658571
Length = 815
Score = 741 bits (383), Expect = 0.0
Identities = 407/415 (98%)
Strand = Plus / Minus
Query: 1 attgagcatgagtttttaacctttttagattaggtggtctattagaaactacatttagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 attgagcatgagtttttaacctttttagattaggtggtctattagaaactacatttagta 556
Query: 61 gctagtaagataatcttaggaaaaatgatgttagcatttattctctgttccaaaagatgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gctagtaagataatcttaggaaaaatgatgttagcatttattctctgttccaaaagatgt 496
Query: 121 cctccagaggatgagaggccttttctagtataaagttaacaaggagccaagctactccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 cctccagaggatgagaggccttttctagtataaagttaacaaggagccaagctactccta 436
Query: 181 tactttcctttggtgacattagcaaatggcttttatctttacaatagcttcatagtcaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tactttcctttggtgacattagcaaatggcttttatctttacaatagcttcatagtcaca 376
Query: 241 atattttttgtaggaaccctggccactgtgtctttcaggtaagaggaggaagggggaggc 300
| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 aaaatgactgtaggaaccctggccactgtgtctttcaggtaagaggaggaagggggaggc 316
Query: 301 tggtcctcttagttaaatcagttcccatacaggagccttcctagaggcttctacgacagc 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 315 tggtcctcttagttaaatcagttcccatacaggagccttcccagaggcttctacgacagc 256
Query: 361 ttctgaatcgtcctcattagtcacatagctagctctaggagcacaggaagctggc 415
||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 255 ttctgaatcgtcctcattagtcagatagctagctctaggagcagaggaagctggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_a07.g1 MSMg01no415_a07.g1 CHROMAT_FILE:
MSMg01no415_a07.g1 PHD_FILE: MSMg01no415_a07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:16 2005
(245 letters)
>mm_chr2_130441420_130442062
Length = 643
Score = 451 bits (233), Expect = e-131
Identities = 242/245 (98%), Gaps = 2/245 (0%)
Strand = Plus / Plus
Query: 1 attcttaagtcaacaaaggctttcaaaatactgatcagatcggaggtgttaaagagctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcttaagtcaacaaaggctttcaaaatactgatcagatcggaggtgttaaagagctgt 260
Query: 61 atgtttttcacactcagctggcagagcaaagcaaagctgttactggatagcaaaacagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtttttcacactcagctggcagagcaaagcaaagctgttactggatagcaaaacagaa 320
Query: 121 ttctgttctgctggcaaagagctgagcttataaaaataattagttactgaacttctggct 180
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 321 ttctgttctgctggcaaagagctgagcttataaaaataattagtta-tga-cttctggct 378
Query: 181 ggagtttattttggtaggatgtgactttgtgcaaaattagttcaacttctgaagcagcta 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggagtttattttggtagaatgtgactttgtgcaaaattagttcaacttctgaagcagcta 438
Query: 241 tgggt 245
|||||
Sbjct: 439 tgggt 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 643
Length adjustment: 9
Effective length of query: 236
Effective length of database: 634
Effective search space: 149624
Effective search space used: 149624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
