XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAC
CTGTACAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAACATCC
TTAATCATCAGGGGAATTCAAATCAAAACAACACTGAGATTCCACTTCAT
TCCAGTCAGAATGGCTAAATTCAAAAACTCAGGTGACAGTAGATGCTGGC
GAGGATGTGGAGAAAGGGGAACACTCCTCCATTGTTGGTGGGATTGCATG
CTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGA
CATAGTACTACCGGAGGATCCCGCAATACCTTTCCTGGGCATATATCCAG
AAGATGTCCTAACCTGTAAGAAGAACACATGCTCCACTATGTTCATAGCA
GCCTTGTTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAAC
AGAAGAATGGATACAGAAAATGTGGTACATTTACACAATGGAATACTACT
CAGCTATTAAAAATGAATTTATGAAATTCCTAGCCCAATGGATGGACCTG
GAGGGTATCATCCTGAGTGAAGTAACCCAATCACAAAGGAACTCGCACAA
TATGTACTCACTGATAAGTGGAAATTACCCCCGAACTTAGGATACCCCAG
AAATAAAATACACTTGCCAAACCCTGAAATTCAAAAAAAGGAGACAAAAC
GGGGAACTTTACCCTTCTTTAAAGGGGTAAACAAACCCTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAAAGGGCAATGAAACACAAAATCAAATCCTGAC
TCTTCAAAATCACAAAAAGAAATAATGTTTAAAAAGTAGGTGTGAGGGGC
AGAAGGGAACCGAAAGGCAGGGAAGAGCAGGGGAGGTGGGGCTTTACAGC
TTGAGAAGCAGAAAAGTGCTTATTAACCCATTTCCTCCTGTGTAAAATAT
ATGACAAATTATTTCTTTAATAGAATTAAATAATATCAGAAAAGAACCTG
GCCCTGGGAGTATTTTATCAAGTGCTGGTTTTTCTGCTTTCCTCCATGAC
AAACACAGCTCCAGAGGCTGCCCGGGATTTAGCACAAATTATAATTCCAC
CTGTTCAACCTACCTAGAAAGGTAGTATTCTAATCTTAGTATCTGAGTGG
AGTCTTAACCCACATAATGCATTGAGTCTATCAGCTTCTTAGCCTGATGA
TCTTATTGACCCTCTGCCCTGCCGCATTGTGCTCTTCTCCCCTAAATGTC
TTTACTTCCTTCCTTAATACTCCCCTCGTGGTCCTCATCCCGGCATCCCC
CCCCCTCCTCGTTCAAATCCTCCTCATTTCCCTCTTTGATCTCAACCTTT
TCCCCCTTCCCCTCCTTCCCTCTTCCTTTTCTTCCCTTCCTTCCCTCCTC
TCCCCTTCTTCGTCCTTTCTTTTCGTGTCCCCTTCCTCTTCCCCTTTTTT
TTTCTCCCCCG

Query= MSMg01no415_f17.g1 MSMg01no415_f17.g1 CHROMAT_FILE:
MSMg01no415_f17.g1 PHD_FILE: MSMg01no415_f17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:43 2005
         (394 letters)



>mm_chr2_108660430_108661229
          Length = 800

 Score =  696 bits (360), Expect = 0.0
 Identities = 388/400 (97%), Gaps = 6/400 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaagggcaatgaaacacaaaatcaaatcctgactcttcaaaatcacaaaaagaaataatg 60
           |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct: 201 aaagggcaatgaaacacaaaatcaaatcctgactcttcaaaatctcaaaaagaagtaatg 260

                                                                       
Query: 61  tttaaaaagtaggtgtgagggg-cagaagggaaccgaaaggcagggaagagcaggggagg 119
           |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 261 tttaaaaagtaggtgtgagggggcagaagggaaacgaaaggcagggaagagcaggggagg 320

                                                                       
Query: 120 tggggctttacagcttgagaagcagaaaagtgcttattaaccca-----tttcctcctgt 174
           ||||||||||||||||||||||||||||| ||||||||||||||     |||||||||||
Sbjct: 321 tggggctttacagcttgagaagcagaaaactgcttattaacccaacccatttcctcctgt 380

                                                                       
Query: 175 gtaaaatatatgacaaattatttctttaatagaattaaataatatcagaaaagaacctgg 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaaaatatatgacaaattatttctttaatagaattaaataatatcagaaaagaacctgg 440

                                                                       
Query: 235 ccctgggagtattttatcaagtgctggtttttctgctttcctccatgacaaacacagctc 294
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccctgggagtagtttatcaagtgctggtttttctgctttcctccatgacaaacacagctc 500

                                                                       
Query: 295 cagaggctgcccgggatttagcacaaattataattccacctgttcaacctacctagaaag 354
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagaggctgcccgggatttaacacaaattataattccacctgttcaacctacctagaaag 560

                                                   
Query: 355 gtagtattctaatcttagtatctgagtggagtcttaaccc 394
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtagtattctaatcttagtatctgagtggagtcttaaccc 600


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 394
Length of database: 800
Length adjustment: 9
Effective length of query: 385
Effective length of database: 791
Effective search space:   304535
Effective search space used:   304535
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)