Query= MSMg01no415_j09.b1 MSMg01no415_j09.b1 CHROMAT_FILE:
MSMg01no415_j09.b1 PHD_FILE: MSMg01no415_j09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:01 2005
(477 letters)
>mm_chr2_112999343_113000218
Length = 876
Score = 822 bits (425), Expect = 0.0
Identities = 449/457 (98%), Gaps = 1/457 (0%)
Strand = Plus / Plus
Query: 21 aggaaggaactatggaagcataaacaacatcttctctctcttcataatgttctaataact 80
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 221 aggaaggcactatggaagcataaacaacatcttctctctcttcataatgttctaataact 280
Query: 81 gagttctattcagctctatttcaccaacatttatcctgaagaaccaacaagcttgctgga 140
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 gagttctattcatctctatttcaccaacatttatcctgaagaaccaacaagcttgctgga 340
Query: 141 cttatttacagagcacacattattattagggttattagcaagaacgaggtgaccccaaag 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 cttatttacagagcacacattattattagggttattagcaagaacgaggtgaccccaaag 400
Query: 201 atgtgctcccaacacaagtaatggcttccttgcagctatgtagatggattccccttactg 260
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 atgtgcacccaacacaagtaatggcttccttgcagctatgtagatggattccccttactg 460
Query: 261 ttaatctcagtttatatactctatcccccctccctctacatgaggtcacatgggtaatta 320
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ttaatctcagtttatatactccatcccccctccctctacatgaggtcacatgggtaatta 520
Query: 321 gggaataactacatacaaatggctgggagaaatgactgcatactcaggtgaggatacaag 380
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 521 gggaataactacatacaaatggctgggagaaatgactgcatactcaagtgaggatacaag 580
Query: 381 tggaaatcccccctccatccttctatgagacaatatcagtagtttacagacatcaccctg 440
||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 581 tggaa-tcccccctccatccttctatgagacaatagcagtagttcacagacatcaccctg 639
Query: 441 attgatacttgcaagtaggcacagctgatttgacaaa 477
|||||||||||||||||||||||||||||||||||||
Sbjct: 640 attgatacttgcaagtaggcacagctgatttgacaaa 676
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 876
Length adjustment: 10
Effective length of query: 467
Effective length of database: 866
Effective search space: 404422
Effective search space used: 404422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_j09.g1 MSMg01no415_j09.g1 CHROMAT_FILE:
MSMg01no415_j09.g1 PHD_FILE: MSMg01no415_j09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:01 2005
(418 letters)
>mm_chr2_113190058_113190875
Length = 818
Score = 741 bits (383), Expect = 0.0
Identities = 406/419 (96%), Gaps = 10/419 (2%)
Strand = Plus / Minus
Query: 1 tattcaacacacattaataaaagcagtaaaatattctttgagaaacagaaattagtttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tattcaacacacattaataaaagcagtaaaatattctttgagaaacagaaattagtttaa 555
Query: 61 tgaaaatattgctaaattagggactggcatcctaatctgacagagcaaataagcacacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tgaaaatattgctaaattagggactggcatcctaatctgacagagcaaataagcacacgt 495
Query: 121 aatatagaactgagttttatgaccagtggctgctactttgattcccattgggaaactctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatatagaactgagttttatgaccagtggctgctactttgattcccattgggaaactctg 435
Query: 181 cttgcttgttctcctccttttactgtgtgcagggaatcttgggaacaaaaatcctgtgtg 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 434 cttgcttgttctcctccttttactgtgtgcagggaatcttgggaacaaaaatcctgcgtg 375
Query: 241 tattttt-----aaatctatattgtctgtggtagttctgagagacagactaaaatgtaac 295
|| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 374 ta-----gaaaaaaatctatattgtctgtggtagttctgagagacagactagaatgtaac 320
Query: 296 aaatatctaataagtgcggcaactagatatgccagaagaactcagaatgagagagaaact 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 aaatatctaataagtgcggcaactagatatgccagaagaactcagaatgagagagaaact 260
Query: 356 agaccccggggtccaggctttaccaagtgttttcttgggatggtctttgattttaaaag 414
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 259 agaccccggggtccaggctttaccaagtgttttcttgggatgggctttgattttaaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
