Query= MSMg01no417_b08.b1 MSMg01no417_b08.b1 CHROMAT_FILE:
MSMg01no417_b08.b1 PHD_FILE: MSMg01no417_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:51 2005
(524 letters)
>mm_chr2_163500655_163501579
Length = 925
Score = 977 bits (505), Expect = 0.0
Identities = 517/521 (99%), Gaps = 1/521 (0%)
Strand = Plus / Minus
Query: 5 gaattccct-aaaaacattccgtcccaggcaagatcctcatgaggcagtgggaaggaaaa 63
||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 725 gaattccctaaaaaaaattccgtcccaggcaagatcctcatgaagcagtgggaaggaaaa 666
Query: 64 tgagggtgactcagcctgagtcaaagcgcagagaaagcgcttctggtaaacagttgctct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tgagggtgactcagcctgagtcaaagcgcagagaaagcgcttctggtaaacagttgctct 606
Query: 124 tttccagacaggattaggatttacccaaaccccgctgctaaaaatacacagataacaggt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tttccagacaggattaggatttacccaaaccccgctgctaaaaatacacagataacaggt 546
Query: 184 ggtatacattatataagtgcttccaaaacagagccttggccactgactctaaaaagagaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ggtatacattatataagtgcttccaaaacagagccttggccactgactctaaaaagagaa 486
Query: 244 cagttaataagagtcagccaggcctgactcttggagaagccccaggaatgagcaaatgtc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cagttaataagagtcagccaggcctgactcttggagaagccccaggaatgagcaaatgtc 426
Query: 304 tccactgaagggaggatgaggcccctcagcgccccactgctctgtcctccagctttaact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tccactgaagggaggatgaggcccctcagcgccccactgctctgtcctccagctttaact 366
Query: 364 cttcacagccagaggctcctacacttgcctctgcacttgctccctcccactgtggaagga 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cttcacagccagaggctcctacacttgcctctgcacttgctccctcccactgtggaagga 306
Query: 424 acccaggctatccccgccagagctagacatacccccagctgggaggcagggcctcaccag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 acccaggctatccccgccagagctagacatacccccagctgggaggcagggcctcaccag 246
Query: 484 gaagcccacatagcctagaactcccattcaagcaaccctgc 524
|||||||||| ||||||||||||||||||||||||||||||
Sbjct: 245 gaagcccacacagcctagaactcccattcaagcaaccctgc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 925
Length adjustment: 10
Effective length of query: 514
Effective length of database: 915
Effective search space: 470310
Effective search space used: 470310
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_b08.g1 MSMg01no417_b08.g1 CHROMAT_FILE:
MSMg01no417_b08.g1 PHD_FILE: MSMg01no417_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:51 2005
(445 letters)
>mm_chr2_163355917_163356761
Length = 845
Score = 853 bits (441), Expect = 0.0
Identities = 444/445 (99%)
Strand = Plus / Plus
Query: 1 ctgtttcctaagaaaagccttgttttgcatttctggaataagactcgggacttttcatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgtttcctaagaaaagccttgttttgcatttctggaataagactcgggacttttcatgt 260
Query: 61 gctgggtgagccgtctgatgagctacagcctcagacccgttttgaacccacacataactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgggtgagccgtctgatgagctacagcctcagacccgttttgaacccacacataactg 320
Query: 121 catgctggcacctgcctgccaggtgtaagaaggcttatcacgtttgctccacagagcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catgctggcacctgcctgccaggtgtaagaaggcttatcacgtttgctccacagagcact 380
Query: 181 ctataaaggggccctattgttgcgtcctatctcgtaggaggagcaaataagatctgaaga 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctataaaggggctctattgttgcgtcctatctcgtaggaggagcaaataagatctgaaga 440
Query: 241 gcttgtaactcgcccagtatcagacagttcaaaggccccagcctcagcacttagctgaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcttgtaactcgcccagtatcagacagttcaaaggccccagcctcagcacttagctgaac 500
Query: 301 tgcctctctgtagctgatagcacctagccagggtctctctgctccttcagttactctcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgcctctctgtagctgatagcacctagccagggtctctctgctccttcagttactctcca 560
Query: 361 aagggcacagcttttacagcctgtcctgtctgtcctaagtgtcccccctaaaattaaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagggcacagcttttacagcctgtcctgtctgtcctaagtgtcccccctaaaattaaagc 620
Query: 421 ccgatgccagtgtccatatatggtc 445
|||||||||||||||||||||||||
Sbjct: 621 ccgatgccagtgtccatatatggtc 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
