GGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGCTTTCATCTGCTTACCCTGACCCTCCAATTAATAGAAATC
TAAGATTTTTAAGGTGGGCCTCAGGTATGATTCTGAGCTCTCTGGACAGC
TCTGACACCATGAGCCTGTGGGTTTCCTAAGCATCCTTTTTCATCTTGCA
CTCTGTACAATGATCTCTCTATCCAGGCAAACTCATCAAGAGAATACGCT
AACTGCTGTGGAGCAGGTAGCATTAGATTCTTTCATGTCAAAGGTTCGGC
ATGGTTCTTCACAGAAAAGCTATGATTTCACTCTGAGGCTATCTTTGGGG
TAGGCCAGACACATTGCAGGGCGGTATGAAAGACAAGGAAACCTCTCTTC
TATTCCAGATCTGGTACCACATATTCCCTCTTGGCCTTCTTTGTCATTTT
TAGGATACAAATGAAATTTGCAGTTTAGAGGAGTTGGCAAGTCAGTTGAT
GGTTCCAAGTAGCGTCAGTTCTCTCATATTTAAATCTGTTTCCCACCTAA
TATCGCAAGGTCACAGTCACTCCATGATCCTGCCCTGGTCACCAGTTCTT
GCCTCCCACTAATTGTGATAACCATGGCTCCAGGTCCACTCCAGCCTACC
TTGGTGGGGGGGGGAAGGGCAATTCTTCATTTTCTCCTTTTCCTTCTTTT
CCCTCCATCCCCCCGCCCGCCTCTTCCTCTCCTCTTTTTCCTTCTTT

CGAATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTATGAAAACTTTAAGGGGGTTTCA
TATACCTCACTGGACAGTGTCTCTAACATTCACAGTGCAAATGTTTGATC
TCCTCCAGGCGTTGCTGCTGGAGCAGAATAACGATTCTATCACCACCCTA
GAGAAGAACTTAGGATGTAGATGGTCAACAATGACCACCACCCTCAGAAA
ACATTTGAAAATATAAGATTGTTAGTGAAACTAGGTTGAGATGTTTTTAC
TACCAGCTCTGATGTAGAAAATCTTAGGAAACAATTTGGAGTTCAAAAAG
GTACACTCTTATTAGTTAAGCTAGGAGCCTTTTATTGTCAGGGAGCGAAA
ACAATGGCAACACTGGCTGATGTGACTCTCACTGAGGCTGGGCTGGTGAT
GATTGCTTTCTTATACCCATTTTGCCCTCAGCTTCCTGATAAAAGTTATT
AGAAATTGCTGATGAGACAGGCGCCGGCGGGAGCCTTCTTGGCTCCGGGA
CTCCGCGGAGGGCAGGCTGCACGGGAGACCGTGTGGAATACACAGGCCAG
CCGTTTCTGGTACGGGTGAAAGTCGTATAAGCTTTCGGGGTGGTGCCCTC
TTTCGCTTCAGAAAAACGGGGCCCCTTCCCGGGGAAGAGCATAGTATTTT
CGTAGGAAGGGCCCTCTTTTGTTTCCTTAAGGCGGTCCCCCTCTCTGTTG
GAGTTATCCAACTTTTTTACGGCTGTTTTCCTCN

Query= MSMg01no417_e18.b1 MSMg01no417_e18.b1 CHROMAT_FILE:
MSMg01no417_e18.b1 PHD_FILE: MSMg01no417_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:08 2005
         (537 letters)



>mm_chr2_44946768_44947704
          Length = 937

 Score = 1017 bits (526), Expect = 0.0
 Identities = 532/534 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagctttcatctgcttaccctgaccctccaattaatagaaatctaagattttta 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ggaattcagctttcatctgcttaccctgaccctccaattaatagaaatctaagattttta 678

                                                                       
Query: 64  aggtgggcctcaggtatgattctgagctctctggacagctctgacaccatgagcctgtgg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 aggtgggcctcaggtatgattctgagctctctggacagctctgacaccatgagcctgtgg 618

                                                                       
Query: 124 gtttcctaagcatcctttttcatcttgcactctgtacaatgatctctctatccaggcaaa 183
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gtttcctaagcgtcctttttcatcttgcactctgtacaatgatctctctatccaggcaaa 558

                                                                       
Query: 184 ctcatcaagagaatacgctaactgctgtggagcaggtagcattagattctttcatgtcaa 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 ctcatcaagagaatacgctaactgctgtggagcaggtagcattagattctttcatgtcaa 498

                                                                       
Query: 244 aggttcggcatggttcttcacagaaaagctatgatttcactctgaggctatctttggggt 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aggttcggcatggttcttcacagaaaagctatgatttcactctgaggctatctttggggt 438

                                                                       
Query: 304 aggccagacacattgcagggcggtatgaaagacaaggaaacctctcttctattccagatc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aggccagacacattgcagggcggtatgaaagacaaggaaacctctcttctattccagatc 378

                                                                       
Query: 364 tggtaccacatattccctcttggccttctttgtcatttttaggatacaaatgaaatttgc 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tggtaccacatattccctcttggccttctttgtcatttttaggatacaaatgaaatttgc 318

                                                                       
Query: 424 agtttagaggagttggcaagtcagttgatggttccaagtagcgtcagttctctcatattt 483
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 agtttagaggagttagcaagtcagttgatggttccaagtagcgtcagttctctcatattt 258

                                                                 
Query: 484 aaatctgtttcccacctaatatcgcaaggtcacagtcactccatgatcctgccc 537
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaatctgtttcccacctaatatcgcaaggtcacagtcactccatgatcctgccc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)