NCCATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCAGTTATATCTGAGGCATGGAAGTTTAGAGAGTAAAGGGAT
ACAGAAGTCAATTCCTAGTCGGTAAGAGATTCTATTCACAGTTTGTACTA
AGTACAGAAAGAATCAGAGATGACATGTAGAGATTGCTTGGGAACTTTTA
CATACAGGCCCCTAGTTTGTACTGGGTAGAAGGGATGGGGATTTAGTGCT
TGAGATACTTATGTTAAAATTGATGCAATCCATTTAGAAAAGGTTCAGTG
CATGTTTCTTACAACTCTTTTGGAATCACTTAGAAAGTCTACATATAAGT
CAATGTACTCTTATCTATTTATCCATCCATCTATCTATCTACCTTGTATG
TACATATGTATGTGTGTATGTGCATATGTATCTATCATCTATGTATGTAT
GTATGTATGTATGTATGTATGTATGTATGCATGTATGCACCGTTCCTANC
CCCTTCTCCTTCTTCCCTTTCTCTCTATTCCCCTTTTTTTTCCACTTTTT
TTCCTCTTCTTTTCCTTTTCCCCCCCCCCCCTTACCTCCTTTTTTTTTTT
TTCTCCCTTCAATATATCCTTCCATCTCCCTCTAATCTAATCCTTTTTTC
CCCCCTCTTTCATTCTTTTTCTCCTTTACTCCCTTTCCCCACCCCTCCTC
TTCTCTCCTTATCTCTTTCTTTTTTCCCCNCGTCTTCTCCCCTTTCCTCA
CTCTTTTN

NTTTCGATGCTATTNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCAT
TTTTTAATGGGGTTATTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTT
ATATATGTTGGATATTAGTCCCCTATCTGATTTAGGATAGGTAAAGATCC
TTTCCCAATCAGTTGGTGGTCTTTTTGTCTTATTGACGGTGTCTTTTGCC
TTGCAGAAACTTTGGAGTTTCATTAGGTCCCATTTGTCAATTCTCGATCT
TACAGCACAAGCCATTGCTGTTCTGTTCAGGAATTTTTCCCCTGTGCCCA
TATCTTCAAGGCTCACATACCAGTTTTAATTACAGGAAAGTTGACTTTTG
ACAGCCTGCAGGTAGAATCACGTATCTGAATAATTATGAGCAGTCATTCT
ATTCGGAAAACTATAACAATTATGAGAGAAAAGACCCCAAATTAAGGCTG
TAGGGCACAGGCTGGAGCACGTGAAGAGATTCCTCTAATATCTTGAAGAC
CACATGATATTATGAAACAGGGAACCCCTTAAGAAGTCATTACCTCATTT
TCTGGTTGGCTATTCACTATTGACCATGTTTTAATATCTTTTCTTAGTAT
TTTTGTTTCTCCTTCTGCTATTACCCCCGGGTGTTTTTCCCCTTTTTTTA
TCTTTCCACTCTTCCCTTTGTAAAATCGCCCTCTTGGTTTCCGCCTATGC
GTTAAAACGTTTTTCACTTTTCC

Query= MSMg01no417_l07.b1 MSMg01no417_l07.b1 CHROMAT_FILE:
MSMg01no417_l07.b1 PHD_FILE: MSMg01no417_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:40 2005
         (437 letters)



>mm_chr2_56273242_56274078
          Length = 837

 Score =  777 bits (402), Expect = 0.0
 Identities = 417/422 (98%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagttatatctgaggcatggaagtttagagagtaaagggatacagaagtcaatt 63
           |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggaattcagttagaaatgaggcatggaagtttagagagtaaagggatacagaagtcaatt 452

                                                                       
Query: 64  cctagtcggtaagagattctattcacagtttgtactaagtacagaaagaatcagagatga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 cctagtcggtaagagattctattcacagtttgtactaagtacagaaagaatcagagatga 392

                                                                       
Query: 124 catgtagagattgcttgggaacttttacatacaggcccctagtttgtactgggtagaagg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 catgtagagattgcttgggaacttttacatacaggcccctagtttgtactgggtagaagg 332

                                                                       
Query: 184 gatggggatttagtgcttgagatacttatgttaaaattgatgcaatccatttagaaaagg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gatggggatttagtgcttgagatacttatgttaaaattgatgcaatccatttagaaaagg 272

                                                                       
Query: 244 ttcagtgcatgtttcttacaactcttttggaatcacttagaaagtctacatataagtcaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 ttcagtgcatgtttcttacaactcttttggaatcacttagaaagtctacatataagtcaa 212

                                                                       
Query: 304 tgtactcttatctatttatccatccatctatctatctaccttgtatgtacatatgtatgt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tgtactcttatctatttatccatccatctatctatctaccttgtatgtacatatgtatgt 152

                                                                       
Query: 364 gtgtatgtgcatatgtatctatcatctatgtatgtatgtatgtatgtatgtatgtatgta 423
           |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 151 gtgtatgtgcatatgtatctatcatctatgtatgtatgtatgtatgtatgcatctatgta 92

             
Query: 424 tg 425
           ||
Sbjct: 91  tg 90


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space:   354384
Effective search space used:   354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)