Query= MSMg01no417_p15.b1 MSMg01no417_p15.b1 CHROMAT_FILE:
MSMg01no417_p15.b1 PHD_FILE: MSMg01no417_p15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:02 2005
(562 letters)
>mm_chr2_130762499_130763460
Length = 962
Score = 1023 bits (529), Expect = 0.0
Identities = 538/541 (99%)
Strand = Plus / Minus
Query: 22 gtatcataataatatcatatttagtttttgtgcttccattatagtttgaggtgcctcctc 81
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gtatcataataatatcatatttagtttttgtgcttccattatagtttgaggtgcctcctc 703
Query: 82 tcataatgcaaggtatatttcaaataatagatatatacatggttaacacatggcaaatgc 141
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ccataatgcaaggtatatttcaaataatagatatatacatggttaacacatggcaaatgc 643
Query: 142 cattttaaatgcttagcacagcctgctctttggcttcattaagtgaaactcttaagttct 201
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 642 cattttaaatgcttagcacagcctgctctttggctccattaagtgaaactcttaagttct 583
Query: 202 cagttaaaataattgttggagagctataggagcaatgggtggagaactagtcttctaatt 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cagttaaaataattgttggagagctataggagcaatgggtggagaactagtcttctaatt 523
Query: 262 tgtcctttgcctccttgcgtactaagtagtccctccctcactatgtggcattccagcaga 321
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tgtcctttgcctccttgcgtactaagtagtccctccctcactatgtggcattccagcaga 463
Query: 322 ctaccaccaagagaagaacagaaaagtgttgatttctttctaaagaaaagaaataagggg 381
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 462 ctaccaccaagagaagaacagaaaagtgttgatttctttctaaagtaaagaaataagggg 403
Query: 382 ccagtgagatacctcagcaggtcaaagccatttgcctagaaaccaagttcaatccttgga 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ccagtgagatacctcagcaggtcaaagccatttgcctagaaaccaagttcaatccttgga 343
Query: 442 agccctgtaaaggtggaattagaaaacagactccacaaaactgtcctctaacctccactc 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 agccctgtaaaggtggaattagaaaacagactccacaaaactgtcctctaacctccactc 283
Query: 502 gggcacacatgtgccaacccctccattctccctcccccacatacaaagtaacaataaact 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 gggcacacatgtgccaacccctccattctccctcccccacatacaaagtaacaataaact 223
Query: 562 t 562
|
Sbjct: 222 t 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_p15.g1 MSMg01no417_p15.g1 CHROMAT_FILE:
MSMg01no417_p15.g1 PHD_FILE: MSMg01no417_p15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:02 2005
(498 letters)
>mm_chr2_130628425_130629325
Length = 901
Score = 909 bits (470), Expect = 0.0
Identities = 493/502 (98%), Gaps = 5/502 (0%)
Strand = Plus / Plus
Query: 1 tttcactttgttggagaaagtggatgctgaaggtggacgacatttgtctgaagaatgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcactttgttggagaaagtggatgctgaaggtggacgacatttgtctgaagaatgtct 260
Query: 61 ggagaccttttgaaagcatgtgtgttgtgaccacatctaataggaaagcacaggtttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggagaccttttgaaagcatgtgtgttgtgaccacatctaataggaaagcacaggtttatt 320
Query: 121 ccatgaacctgatacaaagctcacatctctagttttaacttagtgtctgtagatatatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatgaacctgatacaaagctcacatctctagttttaacttagtgtctgtagatatatac 380
Query: 181 aagcatgagatccaagcatgacatcgaagtcaaatgtacaacttaaaacgtcttaccaaa 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 aagcatgagatccaagcatgacatcgaagtcaaatgtacaacttaaaatgtcttaccaaa 440
Query: 241 ctgaccataagaaaaccatcttccctgcattgtgagatcctaaattacagctgagtcctg 300
||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 ctgaccatatgaaaaccatcttccctgcattgcgagatcctaaattacagctgagtcctg 500
Query: 301 acagaaaacacacctggccttgtccatccttgtggatgtacctgctttgatagttcttgg 360
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 acagaaaacacacctggccttgtccatcct-gtggatgtacctgctttgatagttcttgg 559
Query: 361 ttgggctacagtccaagttgtagtagctttgccattaaaatattacagtaatgaaaaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttgggctacagtccaagttgtagtagctttgccattaaaatattacagtaatgaaaaccc 619
Query: 421 tttaaaaacaacaaaagatgaaacacttttgaataaatgtctac---ccccaacacacac 477
|||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 620 tttaaaaacaacaaaagaagaaacacttttgaataaatgtctactccccccaacacacac 679
Query: 478 acatacacaccaaaaaa-tgtt 498
||||||||||||||||| ||||
Sbjct: 680 acatacacaccaaaaaaatgtt 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 901
Length adjustment: 10
Effective length of query: 488
Effective length of database: 891
Effective search space: 434808
Effective search space used: 434808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
