Query= MSMg01no418_l24.b1 MSMg01no418_l24.b1 CHROMAT_FILE:
MSMg01no418_l24.b1 PHD_FILE: MSMg01no418_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:02 2005
(544 letters)
>mm_chr2_7866755_7867697
Length = 943
Score = 992 bits (513), Expect = 0.0
Identities = 534/541 (98%), Gaps = 3/541 (0%)
Strand = Plus / Plus
Query: 5 gaattccttgaatattcactgagaatttgtaagcttccaaggaaagtttctttgggttca 64
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattccttgaatatgcactgagaatttgtaagctttcaaggaaagtttctttgggttca 264
Query: 65 agttattgcaagttcttgttctaggcagagctgcttctctctgtggcctttatatctcct 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 agttattgcaagttcttgttctaggcagagctgcttctctctgtggcctttatatcccct 324
Query: 125 ctcctgccaccaggcagtagtatcagaatggaattgggacccagagtcatcaagcctcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctcctgccaccaggcagtagtatcagaatggaattgggacccagagtcatcaagcctcct 384
Query: 185 cttcacacagtggtattattggctgtaggtgggtttccttccaggatatttttctcggca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cttcacacagtggtattattggctgtaggtgggtttccttccaggatatttttctcggca 444
Query: 245 tttgcagttgcagttccatggcaggaagtaaggcgttctcaggtgtctagtgagtagagg 304
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 tttgcagttgcagttccatggcaggaagtaaggcgttc-caggtgtctagtgagtagagg 503
Query: 305 acagagaagatgttaaacagccttcagtacaaagggcatgtcttagtcagggtttctact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acagagaagatgttaaacagccttcagtacaaagggcatgtcttagtcagggtttctact 563
Query: 365 cctgcacaaacatcatgaccaagaagctagttggggaggaaagggtgtattcggcttaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cctgcacaaacatcatgaccaagaagctagttggggaggaaagggtgtattcggcttaca 623
Query: 425 tttccatactgctgttgatcatcaaaggaagtcaggactggaactcaagcagatcaggaa 484
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 624 tttccatactgctgttgatcatcaaaggatg-caggactggaactcaagcagatcaggaa 682
Query: 485 gcaggagctgatgca-aggccatggagggatgttctttactggcttgcctcccctggctt 543
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 gcaggagctgatgcagaggccatggagggatgttctttactggcttgcctcccctggctt 742
Query: 544 g 544
|
Sbjct: 743 g 743
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 544
Length of database: 943
Length adjustment: 10
Effective length of query: 534
Effective length of database: 933
Effective search space: 498222
Effective search space used: 498222
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_l24.g1 MSMg01no418_l24.g1 CHROMAT_FILE:
MSMg01no418_l24.g1 PHD_FILE: MSMg01no418_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:02 2005
(593 letters)
>mm_chr2_8064739_8065731
Length = 993
Score = 1093 bits (565), Expect = 0.0
Identities = 584/595 (98%), Gaps = 10/595 (1%)
Strand = Plus / Minus
Query: 1 attttcagaaacaaatggaaacaagaaaaatgccatgctaaaaaaattccaataacacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 931 attttcagaaacaaatggaaacaagaaaaatgccatgctaaaaaaattccaataacacta 872
Query: 61 aggtacatacaa--acacacacacacacacacacatgtacagagagagagagagagagag 118
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 aggtacatacaaacacacacacacacacacacacatgtacagagagagagagaga----- 817
Query: 119 cgagagagagagagagcgagagagagcgctaaaacaagtgcacaagcatgtgattcatgg 178
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 816 -gagagagagagaga--gagagagagcgctaaaacaagtgcacaagcatgtgattcatgg 760
Query: 179 acacatagactttaaacatctgaaaatcttcaagacttaattgtagtaaaagaaaacaag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 acacatagactttaaacatctgaaaatcttcaagacttaattgtagtaaaagaaaacaag 700
Query: 239 gtcatagttcataccatagacaaacagaaaatcacaaaagtctaaatgataagaaacata 298
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 gtcatagttcataccaaagacaaacagaaaatcacaaaagtctaaatgataagaaacata 640
Query: 299 agtcatttcctgaaagatataagtgcatttagttagaattttatacttagttaaactatc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 agtcatttcctgaaagatataagtgcatttagttagaattttatacttagttaaactatc 580
Query: 359 tttcaaaaataatatccaaatggagaccctgttgtaagaaatgtaaaatgaagttattat 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tttcaaaaataatatccaaatggagaccctgttgtaagaaatgtaaaatgaagttattat 520
Query: 419 ggtcaggcaaaatgtataaaacagaagattatattcacaggaagaaacaccagaattggc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggtcaggcaaaatgtataaaacagaagattatattcacaggaagaaacaccagaattggc 460
Query: 479 aaaagtgaaaggtaaactgaaagtatttaattactaattctttttgaaaccattgaataa 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 aaaagtgaaaggtaaactgaaagtatttaattactaattctttttgaaaccattgaataa 400
Query: 539 tctaaagcaaaatttgaaggagtatataaatatattggtgactaatggcatatag 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tctaaagcaaaatttgaaggagtatataaatatattggtgactaatggcatatag 345
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 55
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 993
Length adjustment: 10
Effective length of query: 583
Effective length of database: 983
Effective search space: 573089
Effective search space used: 573089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
