Query= MSMg01no418_o19.b1 MSMg01no418_o19.b1 CHROMAT_FILE:
MSMg01no418_o19.b1 PHD_FILE: MSMg01no418_o19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:15 2005
(430 letters)
>mm_chr2_25559311_25560140
Length = 830
Score = 758 bits (392), Expect = 0.0
Identities = 418/432 (96%), Gaps = 10/432 (2%)
Strand = Plus / Minus
Query: 4 ggaattctgctcatgtctcctgagcacagtcctagctcctgggctatcatgccaaatcca 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 ggaattctgctcatgcctcctgagcacagtcctagctcctgggctatcatgccaaatcca 571
Query: 64 gggtagcatgcctgaatcctcagtaccgacccggagagcaggaaacggggtggaggactg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gggtagcatgcctgaatcctcagtaccgacccggagagcaggaaacggggtggaggactg 511
Query: 124 tcatgtgctgtggtgtcaactctgcatattgaggctggacttagaagtcttcctcatgtc 183
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tcatgtgctgtggtgtcaactctgcatattgaggctggacttagaagtcttcctcatgtt 451
Query: 184 ctgatcgcaacagagaacaatatcaagtatttgaacttggggcagttctggggcccacag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 ctgatcgcaacagagaacaatatcaagtatttgaacttggggcagttctggggcccacag 391
Query: 244 ttaaaggccatgcgtagtccctgtctgaagca-----tttttagaacctggtatgtagga 298
|||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 390 ttaaaggccatgcgtagtccctgtctgaagcaaaaag-----agaacctggtatgtagga 336
Query: 299 tccggcttggcccggtcctgcctccaagtgtcctggacacctcaggccccaccttaaaaa 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tccggcttggcccggtcctgcctccaagtgtcctggacacctcaggccccaccttaaaaa 276
Query: 359 catccaatagctcccagcaagaactgggtccagataggaaaggaattcagagagaacgat 418
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 275 catccaatagctcccagcaagaactgggtccagataggaaaggaattcagaaagaacgat 216
Query: 419 gagtcatgtggg 430
|||||| |||||
Sbjct: 215 gagtcacgtggg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_o19.g1 MSMg01no418_o19.g1 CHROMAT_FILE:
MSMg01no418_o19.g1 PHD_FILE: MSMg01no418_o19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:38:15 2005
(454 letters)
>mm_chr2_25404339_25405192
Length = 854
Score = 843 bits (436), Expect = 0.0
Identities = 448/452 (99%)
Strand = Plus / Plus
Query: 1 ccctaactgaatcaggaatcccacccataggacagcaaagttgtcctcttctgctgaagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccctaactgaatcaggaatcccacccataggacagcaaagttgtcctcttctgctgaagt 260
Query: 61 tcaggcaactgctgggtcacgtagcttcctggagcctttggggcttattcacggtagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaggcaactgctgggtcacgtagcttcctggagcctttggggcttattcacggtagtga 320
Query: 121 gtccacacctgtggagccttctttaccagtgggaggaggtgtttcctgagagccccgagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtccacacctgtggagccttctttaccagtgggaggaggtgtttcctgagagccccgagg 380
Query: 181 agcctgagaagctagcctgaacgtaagctcattcgctgagagcatctgctccctcagggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcctgagaagctagcctgaacgtaagctcattcgctgagagcatctgctccctcagggc 440
Query: 241 aaaatgcttgtgtgctccatgctccagaccttccctcacccacatccaccaaagatctca 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatgcaggtgtgctccatgctccagaccttccctcacccacatccaccaaagatctca 500
Query: 301 tcggcaactgtgcccacagaccttaaaggcaacagagccagagaccatcgttgccatagc 360
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 ttggcaactgtgcccacagaccttaaaggcaacagagccagagaccatcgttgccataac 560
Query: 361 aaccttaaccatagcctaccagtacaacacctgctgccacaaaaatgtcactttagactt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaccttaaccatagcctaccagtacaacacctgctgccacaaaaatgtcactttagactt 620
Query: 421 ttctacttggagattttatgtgcactctttgg 452
||||||||||||||||||||||||||||||||
Sbjct: 621 ttctacttggagattttatgtgcactctttgg 652
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
