Query= MSMg01no419_i23.b1 MSMg01no419_i23.b1 CHROMAT_FILE:
MSMg01no419_i23.b1 PHD_FILE: MSMg01no419_i23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:08 2005
(415 letters)
>mm_chr2_120671628_120672442
Length = 815
Score = 775 bits (401), Expect = 0.0
Identities = 404/405 (99%)
Strand = Plus / Minus
Query: 10 ggagagatggctcaatgtttaaaagcacctgctcttcttacagaagacctgtgttccgtt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 ggagagatggctcaatgtttaaaagcacctgctcttcttacagaagacctgtgttccgtt 756
Query: 70 ttcagcagccacatggtggttctcaaccatcaatagcttcggttctagggggtccagtgc 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 ttcagcagccacatggtggttctcaaccatcaatagcttcggttctagggggtccagtgc 696
Query: 130 tgccttctgaccgtcagggcaccagacccacatgtgcacagacatacatccatgcagaca 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tgccttctgaccgtcagggcaccagacccacatgtgcacagacatacatccatgcagaca 636
Query: 190 aaagtatcattcatatatgtacctatatgtatgcatacatacatatatataaattattca 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaagtatcattcatatatgtacctatatgtatgcatacatacatatatataaattattca 576
Query: 250 aagtaatctctgaatctttgaacagtgagttattgtaataaatgcttacaaccattttta 309
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 aagcaatctctgaatctttgaacagtgagttattgtaataaatgcttacaaccattttta 516
Query: 310 atacttgctaagcattttccatgttatactgctgtgggttaaagattgaacagtagacaa 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 atacttgctaagcattttccatgttatactgctgtgggttaaagattgaacagtagacaa 456
Query: 370 aagagaaatatctctttacttttgagcttatgatacacttttgag 414
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 aagagaaatatctctttacttttgagcttatgatacacttttgag 411
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_i23.g1 MSMg01no419_i23.g1 CHROMAT_FILE:
MSMg01no419_i23.g1 PHD_FILE: MSMg01no419_i23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:09 2005
(408 letters)
>mm_chr2_120538947_120539758
Length = 812
Score = 762 bits (394), Expect = 0.0
Identities = 406/412 (98%), Gaps = 4/412 (0%)
Strand = Plus / Plus
Query: 1 tcttccactcgacatgggttcttgggtgcaagtgtggtgtcccagccactctctcaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttccactcgacatgggttcttgggtgcaagtgtggtgtcccagccactctctcaagtc 260
Query: 61 tgggcagctgtgagtgatcccactttgtggcctctgtatcacaagcccatccagacagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggcagctgtgagtgatcccactttgtggcctctgtatcacaagcccatccagacagca 320
Query: 121 aggctacatcagcgggtgaccaacagcatcagcctgggtgagtctaagggcttgaaagct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggctacatcagcgggtgaccaacagcatcagcctgggtgagtctaagggcttgaaagct 380
Query: 181 tccaaaggcctggcagggagtcaagaggtagaaggtcaaagcagcactgttgggaactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaaaggcctggcagggagtcaagaggtagaaggtcaaagcagcactgttgggaactct 440
Query: 241 agacttctcagcaagaccgctagggatccagttatggagtaaagcaggggcttcttaaca 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agacttctcagcaagaccactagggatccagttatggagtaaagcaggggcttcttaaca 500
Query: 301 ctgaagaactaggattcaatctgtct----ttctagtgtacttggtgtgcgataccacac 356
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 501 ctgaagaactaggattcaatctgtctgtctttctagtgtacttggtgtgcaataccacac 560
Query: 357 tgtgtgagctgaagcaactgcgagatttctgctgtgtctgcgtggaagccaa 408
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgtgagctgaagcaactgcgagatttctgctgtgtctgcgtggaagccaa 612
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 812
Length adjustment: 9
Effective length of query: 399
Effective length of database: 803
Effective search space: 320397
Effective search space used: 320397
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
