Query= MSMg01no419_m09.b1 MSMg01no419_m09.b1 CHROMAT_FILE:
MSMg01no419_m09.b1 PHD_FILE: MSMg01no419_m09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:25 2005
(371 letters)
>mm_chr2_96652513_96653283
Length = 771
Score = 690 bits (357), Expect = 0.0
Identities = 368/373 (98%), Gaps = 4/373 (1%)
Strand = Plus / Plus
Query: 1 aattttagtgtccagaaatgaaaagaatttagagggctgtggaac--gtgctgaattttc 58
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 201 aattttagtgtccagaaatgaaaagaatttagagggctgtgg--ccagtgctgaattttc 258
Query: 59 atacagcgtcagctctagtcatttgttcttgacacccacattaacaggtcatgctcacat 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atacagcgtcagctctagtcatttgttcttgacacccacattaacaggtcatgctcacat 318
Query: 119 agctcactctccacctttttgttcaagattccgagaggcctgactttcccatttgaaagc 178
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 319 agctcactctccacctttttgttcaagattccgagaggcctgactttcccatctgaaagc 378
Query: 179 tggctctctgtaagaggaatgtatgaaattataatagaatcccaaaaagcctgttgtctt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tggctctctgtaagaggaatgtatgaaattataatagaatcccaaaaagcctgttgtctt 438
Query: 239 cataagacctttgacaatataacttcaaaccgtaatttggagaagacagaatctttcaag 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cataagacctttgacaatataacttcaaaccgtaatttggagaagacagaatctttcaag 498
Query: 299 ccatggatgagagatctgtacaatcctctcaggaatgctgatttaactacaccaagccca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ccatggatgagagatctgtacaatcctctcaggaatgctgatttaactacaccaagccca 558
Query: 359 ttgtcatctgcat 371
|||||||||||||
Sbjct: 559 ttgtcatctgcat 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no419_m09.g1 MSMg01no419_m09.g1 CHROMAT_FILE:
MSMg01no419_m09.g1 PHD_FILE: MSMg01no419_m09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:25 2005
(499 letters)
>mm_chr2_96708635_96709533
Length = 899
Score = 482 bits (249), Expect = e-140
Identities = 255/257 (99%)
Strand = Plus / Minus
Query: 243 aaaaggctgaatctacttgggccgagtagatgccattcaactacttagtcactcaacaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aaaaggctgaatctacttgggccgagtagatgccattcaactacttagtcactcaacaaa 640
Query: 303 tatttttagcctctatcctgtacacgacaccttttatgtacttgttctccaaagccctta 362
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 639 tatttttagcctctatcctgtacacgacaccttttaagtacttgttctccaaagccctta 580
Query: 363 ttgattttctcttaagttgaaattcctcaaggtttttcctgttctcagaattaccctgtt 422
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 579 ttgattttctcttaagttgaaattcctcgaggtttttcctgttctcagaattaccctgtt 520
Query: 423 tttgggatacctgcatgatgtgcaatgactttgtctagtagactagagacaggactctcc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 tttgggatacctgcatgatgtgcaatgactttgtctagtagactagagacaggactctcc 460
Query: 483 cattctcattaatgagg 499
|||||||||||||||||
Sbjct: 459 cattctcattaatgagg 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
