Query= MSMg01no421_f05.b1 MSMg01no421_f05.b1 CHROMAT_FILE:
MSMg01no421_f05.b1 PHD_FILE: MSMg01no421_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:27 2005
(521 letters)
>mm_chr2_81427584_81428508
Length = 925
Score = 719 bits (372), Expect = 0.0
Identities = 448/476 (94%), Gaps = 12/476 (2%)
Strand = Plus / Minus
Query: 56 tggatataaaattaactcaaacaaatcaataacctttctctacacaaaggataaatggac 115
|||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||
Sbjct: 925 tggatataaaattaactcaaacaaatcaatggcctttccctacacaaaggataaacggac 866
Query: 116 tgagaaagaaattagggaaacaacgcccttcacaatagtcacaaataatataaaatacct 175
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 865 tgagaaagaaattagggaaacaacacccttcacaatagtcacaaataatataaaatacct 806
Query: 176 tggtgtgactctaactaagggagtgaaagatctgt---ataagaacttcaagtctctaaa 232
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||
Sbjct: 805 tggtgtgactctaactaaggaagtgaaagatctgtatgataagaacttcaagtctctaaa 746
Query: 233 gaaag-aactg-aagatctcctttgcttttaatttgca-t-tgtataaaaaaagagttat 288
||||| ||||| ||| |||| ||||||||||||||||| | |||| ||||||| ||||||
Sbjct: 745 gaaagaaactgaaag-tctcttttgcttttaatttgcagtgtgta-aaaaaaaaagttat 688
Query: 289 catttgtgttttgaagaatcttacagatttgttaaggatctttggtgtgctagttttcac 348
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 687 catttgtgttttgaagaatcttacagatttgttgagaatctttggtgtgctagttttcac 628
Query: 349 ttcactttaaataattaattgtatctatgtagatctacttacacacatccataggtgggg 408
||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||
Sbjct: 627 ttcactttaaataatcaattgtatctatgtagatctatttacacacatccgtaggtgggg 568
Query: 409 agggaattacaggtataaaggttctttatatttattgaatctttattctgttttctaata 468
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agggaattacaggtataaatgttctttatatttattgaatctttattctgttttctaatc 508
Query: 469 tctttggataatctctattatcat---tattgccctgccctcctactattttcaat 521
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 507 tctttggacaatctctattatcatcattattgccctgccctcctactattttcaat 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 925
Length adjustment: 10
Effective length of query: 511
Effective length of database: 915
Effective search space: 467565
Effective search space used: 467565
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_f05.g1 MSMg01no421_f05.g1 CHROMAT_FILE:
MSMg01no421_f05.g1 PHD_FILE: MSMg01no421_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:27 2005
(486 letters)
>mm_chr2_81261837_81262721
Length = 885
Score = 909 bits (470), Expect = 0.0
Identities = 482/486 (99%), Gaps = 1/486 (0%)
Strand = Plus / Plus
Query: 1 aaaaactttatagctagtagatttcatattgatgattgattctatttctaatgtggacat 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaaaa-tttatagctagtagatttcatattgatgattgattctatttctaatgtggacat 259
Query: 61 agattgttttcacttattatcactctgtacttaagccacttttaatatgaatatcatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agattgttttcacttattatcactctgtacttaagccacttttaatatgaatatcatgga 319
Query: 121 gtttcttacatttcccttggactttggctaaaaaaagtaaattaacataaggtataattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtttcttacatttcccttggactttggctaaaaaaagtaaattaacataaggtataattt 379
Query: 181 tattggcacttctataaatgaacttttctctgtttaaaagtttttatttattgtcacatc 240
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 380 tataggcacttctataaatgaacttttctctgtctaaaagtttttatttattgtcacatc 439
Query: 241 acctggaaataggcattactatcataaagaataaaaactcagtgcttgagacaaataata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 acctggaaataggcattactatcataaagaataaaaactcagtgcttgagacaaataata 499
Query: 301 tgccatttgtttattgacttaatttgaattataaaattcatttgatattatagtacttat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgccatttgtttattgacttaatttgaattataaaattcatttgatattatagtacttat 559
Query: 361 tttaaaatagctaggattagattcacatccatgtgtatataatagtaattacttggtcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttaaaatagctaggattagattcacatccatgtgtatataatagtaattacttggtcct 619
Query: 421 attttttactaattgttgataaatagaagcacattctgacctttgcctgctcataattat 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 620 attttttactaattgttgataaatagaagcacattctgacatttgcctgctcataattat 679
Query: 481 tatatt 486
||||||
Sbjct: 680 tatatt 685
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 885
Length adjustment: 10
Effective length of query: 476
Effective length of database: 875
Effective search space: 416500
Effective search space used: 416500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
