Query= MSMg01no421_n07.b1 MSMg01no421_n07.b1 CHROMAT_FILE:
MSMg01no421_n07.b1 PHD_FILE: MSMg01no421_n07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:08 2005
(409 letters)
>mm_chr2_163589850_163590658
Length = 809
Score = 733 bits (379), Expect = 0.0
Identities = 394/399 (98%)
Strand = Plus / Plus
Query: 11 tacacggtcttccccaagctgtagccacgaccctcccaagtgagggtggcctctaatctt 70
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tacacggtcctccccaagctgtagccacgaccctcccaagtgagggtggcctctaatctc 270
Query: 71 aggtcttcaatcacccagaaagcagggagggactggataagccccggcttttcttttttc 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aggtcttcaatcacccagaaagcagggagggactggataagccccggcttttcttttttc 330
Query: 131 tttgtgtctctctgctcacaccctacctctactgtgcacttgaccgtgggatctactcca 190
||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 331 tttgtgtctctctgcccacaccctacctgtactgtgcacttgaccgtgggatctactcca 390
Query: 191 cccccatctcttcctttcttctggcaacttctcaatcatttgattcacagttcagaaaaa 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 cccccatctcttcctttcttctggcaacttctcaatcatttgattcacagttcagaaaaa 450
Query: 251 gccctctggcagttattctgacttctgtggatataatcacgtgttgttcaggctctgacg 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gccctctggcagttattctgacttctgtggatataatcacgtgttgttcaggctctgacg 510
Query: 311 aggcagcctgtggacctctttcccctcacagtcccctgaagaaagggcagtccccttctt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 511 aggcagcctgtggacctctttcccctcacagtcccctgaagaaagggcagtccccgtctt 570
Query: 371 cacagttcactccgatttccactacaaagcatttaagaa 409
|||||||||||||||||||||||||||||||||||||||
Sbjct: 571 cacagttcactccgatttccactacaaagcatttaagaa 609
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 409
Length of database: 809
Length adjustment: 9
Effective length of query: 400
Effective length of database: 800
Effective search space: 320000
Effective search space used: 320000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_n07.g1 MSMg01no421_n07.g1 CHROMAT_FILE:
MSMg01no421_n07.g1 PHD_FILE: MSMg01no421_n07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:08 2005
(245 letters)
>mm_chr2_163753015_163753660
Length = 646
Score = 427 bits (221), Expect = e-124
Identities = 239/245 (97%), Gaps = 1/245 (0%)
Strand = Plus / Minus
Query: 2 tcttttt-aaccacctcatttggtgattgcctcattactcttccgtattttcccctaccc 60
||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 446 tctttttaaaccacctcatttggtgattgcctcattactcttccatattttcccctaccc 387
Query: 61 cacattttcctgtttccttttgacgttacctagcttgcaaagtttcttttccaatttttt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 386 cacattttcctgtttccttttgacgttgcctagcttgcaaagtttcttttccaatttttt 327
Query: 121 ccccattatttccaaaacatttctatttaagaccccagttagttttgccagcacaggata 180
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 326 tcccattatttccaaaacatttctatttatgaccccagttagttttgccagcacaggata 267
Query: 181 aggtctatgggtatactgtccatatgaggaaactaagatcccaatgggatgtggtttatc 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 266 aggtctatgggtatactgtccatatgaggaagctaagatcccaatgggatgtggtttatc 207
Query: 241 atggg 245
|||||
Sbjct: 206 atggg 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
