Query= MSMg01no422_f12.b1 MSMg01no422_f12.b1 CHROMAT_FILE:
MSMg01no422_f12.b1 PHD_FILE: MSMg01no422_f12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:46 2005
(326 letters)
>mm_chr2_58253262_58253987
Length = 726
Score = 590 bits (305), Expect = e-173
Identities = 317/321 (98%)
Strand = Plus / Minus
Query: 6 gaattctactttctccagtctacagcaagcacttctcgtgctcccttgccctccccttgt 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaattctactttctctagtctacagcaagcacttctcgtgctcccttgccctccccttgt 604
Query: 66 ttacctttcctcgctggggatggaactcagcgcctcacacatgctaggtgactcttctcc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ttacctttcctcgctggggatggaactcagcgcctcacacatgctaggtgactcttctcc 544
Query: 126 cactacactcccagctcactgttatttttggaagactaagaaataaatcctattactata 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 cactacactcccagctcactgttatttttggaagactaagaaataaatcctattactata 484
Query: 186 cttatttaggctctggagacctttgtaactttaggcatcctggtacttactgtgacaaag 245
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 483 cttatttaggctctggagacctttgtaattttaggcatcctggtacttactgtgacaaag 424
Query: 246 gagggatgactttaagggctgctcagatattttctatatagaaaatctattcaaacacct 305
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 423 gagggatgactttaagggctgctcagatattttcaatatataaaatctattcaaacacct 364
Query: 306 ttaaatgcccaatgttctcta 326
|||||||||||||||||||||
Sbjct: 363 ttaaatgcccaatgttctcta 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_f12.g1 MSMg01no422_f12.g1 CHROMAT_FILE:
MSMg01no422_f12.g1 PHD_FILE: MSMg01no422_f12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:46 2005
(224 letters)
>mm_chr2_58071395_58072017
Length = 623
Score = 402 bits (208), Expect = e-117
Identities = 220/224 (98%), Gaps = 1/224 (0%)
Strand = Plus / Plus
Query: 1 gtcactcagaatagacctaaatacatgtttaaatgtttttcccttaatgaaagggaaatg 60
||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 gtcactcagaatagaactaaatacatgtttaaatg-ttttcccttaatgaaagggaaatg 259
Query: 61 agatctgtgtagtagtctcattttccttctgaattttgggactcttctactacctgggca 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 agacctgtgtagtagtctcattttccttctgaattttgggactcttctactacctgggca 319
Query: 121 gtccagatggtatagcctgataccctggtgcactaagactcttgtgaatatacccttgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gtccagatggtatagcctgataccctggtgcactaagactcttgtgaatatacccttgta 379
Query: 181 gttgaagtgaaccccatgcacagcttttgttttacatttattgt 224
||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gtttaagtgaaccccatgcacagcttttgttttacatttattgt 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 623
Length adjustment: 9
Effective length of query: 215
Effective length of database: 614
Effective search space: 132010
Effective search space used: 132010
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
