Query= MSMg01no422_l14.b1 MSMg01no422_l14.b1 CHROMAT_FILE:
MSMg01no422_l14.b1 PHD_FILE: MSMg01no422_l14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:14 2005
(518 letters)
>mm_chr2_148110624_148111543
Length = 920
Score = 855 bits (442), Expect = 0.0
Identities = 497/516 (96%), Gaps = 2/516 (0%)
Strand = Plus / Minus
Query: 5 gaattcataaccctttcacatttgcctgattagaagcatgtggcaccacacccaactgga 64
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gaattcataaccctcccacatttgcctgattagaagcatgtggcaccacacccaactgga 661
Query: 65 catgcaagttctgggggctagaaaatgataagagattggaatccgtttgctattaaagct 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 660 catgcaagttttgggggctagaaaatgataagagattggaatccgtttgctattacagct 601
Query: 125 catgctgatttgatgagtgtctccacacaccttcttcagcttttttcattggtctcatga 184
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct: 600 cctgctgatttgatgagtgtctccacacaccttcttcagcttttttcactggtctcacaa 541
Query: 185 aaagtggaatgtatcctcttcaaactctgtgtcttcaa--tatactatggctccaggtta 242
|||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 540 aaagtggaatgtatcctcttcaaactctgtgtgttcaaattatgctatggctccaggtta 481
Query: 243 ctaagaactggtaataaacactaatatgaaagtaatggctaggccattttaattgaaaaa 302
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 480 ctaagaactggtaataaacagtaatatgaaaataatggctaggccattttaattgaaaaa 421
Query: 303 cttactccttgcaaggatgtaggccagcagtcatgggcacaggtctcttcacacacctgt 362
|||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 420 cttacttcttgcaaggatgtaggccagcagtcttaggcacaggtctcttcacacacctgt 361
Query: 363 ttgtcaacatcaaatgacaaatatgccaaaaacaatatgactgacacagtgctgttgcct 422
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 360 ttgtcaacatcaaatgacaaatatgcccaaaacaatatgactgacacagtgctgttgcct 301
Query: 423 gaaattgtttccttgattaaaattatggataatttaaaacatcataatagggatagttct 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gaaattgtttccttgattaaaattatggataatttaaaacatcataatagggatagttct 241
Query: 483 ccctgttcaactgctgtattgattgatactcaccag 518
||||||||||||||||||||||||||| ||||||||
Sbjct: 240 ccctgttcaactgctgtattgattgattctcaccag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 920
Length adjustment: 10
Effective length of query: 508
Effective length of database: 910
Effective search space: 462280
Effective search space used: 462280
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_l14.g1 MSMg01no422_l14.g1 CHROMAT_FILE:
MSMg01no422_l14.g1 PHD_FILE: MSMg01no422_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:14 2005
(491 letters)
>mm_chr2_147911996_147912886
Length = 891
Score = 926 bits (479), Expect = 0.0
Identities = 488/491 (99%)
Strand = Plus / Plus
Query: 1 aaactaaaagtataaagtcgaggctttgctacccatgtaggggagcttgcttgatacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaactaaaagtataaagtcgaggctttgctacccatgtaggggagcttgcttgatacatt 260
Query: 61 cataacttcctaactcaaacaaagcagccacagagggcttcagcctgggaggagggacca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cataacttcctaactcaaacaaagcagccacagagggcttcagcctgggaggagggacca 320
Query: 121 tttgggaagctcatgactccactggtacatctcacagttggataaggcagacatgtggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttgggaagctcatgactccactggtacatctcacagttggataaggcagacatgtggaa 380
Query: 181 accttttcttgaggtctgtatgctgtgtgccatgggtaaattttaaaaatgtattttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accttttcttgaggtctgtatgctgtgtgccatgggtaaattttaaaaatgtattttaat 440
Query: 241 caacataatattgttatgctttctgtgtgtctgtgtgtctttctgtctctttcatgacag 300
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caacataatattggcatgctttctgtgtgtctgtgtgtctttctgtctctttcatgacag 500
Query: 301 ggtctcactatgtagccacagatgcctctgctttctgggtaatggaaaaacagacatgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtctcactatgtagccacagatgcctctgctttctgggtaatggaaaaacagacatgac 560
Query: 361 acccaccttgcctgtcacagtatgtgtagataaacattaggcagagaaaaaatattctag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acccaccttgcctgtcacagtatgtgtagataaacattaggcagagaaaaaatattctag 620
Query: 421 ggacctaaattggacatttcacgaattcctcatttgatctatttttttcctaatccatga 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 ggacctaaattggacatttcacgaattcctcatttgatctatttttttcctaatccctga 680
Query: 481 gcaattctaaa 491
|||||||||||
Sbjct: 681 gcaattctaaa 691
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 891
Length adjustment: 10
Effective length of query: 481
Effective length of database: 881
Effective search space: 423761
Effective search space used: 423761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
