Query= MSMg01no423_c20.b1 MSMg01no423_c20.b1 CHROMAT_FILE:
MSMg01no423_c20.b1 PHD_FILE: MSMg01no423_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:47 2005
(513 letters)
>mm_chr2_72585980_72586892
Length = 913
Score = 884 bits (457), Expect = 0.0
Identities = 492/511 (96%), Gaps = 12/511 (2%)
Strand = Plus / Plus
Query: 1 gcctttggctctccctaccttgtaaacacagaagctgggaaagtaagtcaaccagctcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcctttggctctccctaccttgtaaacacagaagctgggaaagtaagtcaaccagctcaa 260
Query: 61 ctttcccaagtaacctttacatgccagcagccagggcaactgtgtgctccctggtactga 120
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 261 ctttcccaagtaacctttacaagccagcagccagggcaactgtgtgctccctggcactga 320
Query: 121 ggtgagacatatccctgctctcagcttccctgggctaagtgatcctagcatctaaacaca 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 321 ggtgagacatatccctgctctcagcttccctgggctaagtgatccaagcatctaaacaca 380
Query: 181 cctttgtgtgtgagatctgccattgagtcaactgagtgccctggaccatgagcccagtcc 240
||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctttgt------------ccattgagtcaactgagtgccctggaccatgagcccagtcc 428
Query: 241 tgtttggccccaaagtagacagagaaccagcctctatgaacaagctttaatagcataagc 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tgtttggccccaaagtagccagagaaccagcctctatgaacaagctttaatagcataagc 488
Query: 301 atgatttcacattatcccagggcagtcctgtggtgcattttcttatggacagggacattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 atgatttcacattatcccagggcagtcctgtggtgcattttcttatggacagggacattc 548
Query: 361 ctgggttagctccttgggtcagtgtcagttacaacagctaccttgctatatccttgctgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 549 ctgggttagctccttgggtcagtgtcagttacaacagctaccttgctatatcctttctgg 608
Query: 421 ctgtttttactatcagagatctctttaggtaaatcacatctaaactctgtgtggactatg 480
||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 609 ctgtttttactatcagagacctctttagataaatcacatctaaactctgtgtggactatg 668
Query: 481 gtggagggagacacccatcttggagggagcc 511
|||||||||||||||||||||||||||||||
Sbjct: 669 gtggagggagacacccatcttggagggagcc 699
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no423_c20.g1 MSMg01no423_c20.g1 CHROMAT_FILE:
MSMg01no423_c20.g1 PHD_FILE: MSMg01no423_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:43:48 2005
(245 letters)
>mm_chr2_72755482_72756126
Length = 645
Score = 443 bits (229), Expect = e-129
Identities = 241/245 (98%)
Strand = Plus / Minus
Query: 1 ttctttttccttctcagggacttccagaaaaggctccgaggtggattcttatttggttaa 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 445 ttctttttccttctcagggacttccagaaaaggttccgaggtggattcttatttggttaa 386
Query: 61 ttgggttttatgctcacccctgattcattctctatggctagagacatagaacaacccgaa 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgggttttatgctcatccctgattcattctctatggctagagacatagaacaacccgaa 326
Query: 121 tgcacagacccaagctgcctgctcaccttggagccttagagatggcgagcgtcccaccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgcacagacccaagctgcctgctcaccttggagccttagagatggcgagcgtcccaccca 266
Query: 181 tattttaacaagcaagaggtgtggctgagaggtggctgtctgagcagaaaggagaatcct 240
||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 265 tattttaacaagcaagaagtgtggccgagaggtggctgtctgagcagaaaggagaatcct 206
Query: 241 tgtga 245
|||||
Sbjct: 205 tgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
