Query= MSMg01no424_a03.b1 MSMg01no424_a03.b1 CHROMAT_FILE:
MSMg01no424_a03.b1 PHD_FILE: MSMg01no424_a03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:50 2005
(532 letters)
>mm_chr2_169958212_169959144
Length = 933
Score = 988 bits (511), Expect = 0.0
Identities = 523/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Minus
Query: 7 ggaattccgatctctccatgtcccttggaaaacacggtatgtgtttgcaagctcagccgt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ggaattccgatctctccatgtcccttggaaaacacggtatgtgtttgcaagctcagccgt 674
Query: 67 cactggcagaattttgcaacgatttcccagttttgttggcacgtctccaggagggaaggt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cactggcagaattttgcaacgatttcccagttttgttggcacgtctccaggagggaaggt 614
Query: 127 tctttgtaattctttgctcagacatcaggatctcatacaaacctcttagcagatagatca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tctttgtaattctttgctcagacatcaggatctcatacaaacctcttagcagatagatca 554
Query: 187 gggaaggcaaatccctttcaattttaagagctacaacatagtaagtccccctccccctta 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 gggaaggcaaatccctttcaattttaagagctacaacatagtaagtccccctccccctta 494
Query: 247 tttgtggtggtgggaggagagagatgttaaacagtaacagaccatctgatgccaaaatgg 306
||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||
Sbjct: 493 tttgtggtggtgggaggagagggatgagaaacagtaacagaccatctgatgccaaaatgg 434
Query: 307 cttaacagagtatggctttgtgagggcatggagaaccg-cccccccctccctttcttcct 365
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 433 cttaacagagtatggctttgtgagggcatggagaaccgccccccccctccctttcttcct 374
Query: 366 ttactctgaaaataactcagtagctacaaggtctgagagcccgagtctcattgttcttag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ttactctgaaaataactcagtagctacaaggtctgagagcccgagtctcattgttcttag 314
Query: 426 ccaaatgattgtttgtcaaaatatttgattgtttccctgttgctgctgagacgtttggac 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ccaaatgattgtttgtcaaaatatttgattgtttccctgttgctgctgagacgtttggac 254
Query: 486 tttcctttctgtcccatctccacactagggtttttaactatcagcta 532
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tttcctttctgtcccatctccacactagggtttttaactatcagcta 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 933
Length adjustment: 10
Effective length of query: 522
Effective length of database: 923
Effective search space: 481806
Effective search space used: 481806
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_a03.g1 MSMg01no424_a03.g1 CHROMAT_FILE:
MSMg01no424_a03.g1 PHD_FILE: MSMg01no424_a03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:44:50 2005
(240 letters)
>mm_chr2_169826400_169827039
Length = 640
Score = 426 bits (220), Expect = e-124
Identities = 235/240 (97%)
Strand = Plus / Plus
Query: 1 caggccaggctggaccccacctcaaaacagataaatcagtaaaacaaatagtgataagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggccaggctggaccccacctcaaaacagataaatcagtaaaacaaatagtgataagga 260
Query: 61 aagttctgactgcaactatcaaagctcaatggaaaatacacattaaatgcatatacaacc 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagttctggctgcaactatcaaagctcaatggaaaatacacattaaatgcatatacaacc 320
Query: 121 aacaacaacaacatcaacaacaccaaaaccactaccacgacctagtccacagtagtgaca 180
|||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct: 321 aacaacaacaacatcaacaacaccaaaaccactaccacaacctagtccacaggagtgaca 380
Query: 181 cagacattaagggatatatcataaggccaacatcatagacccaggcagtcacaggagaaa 240
||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 caggcattaagggatatatcataaggccaacatcagagacccaggcagtcacaggagaaa 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
