Query= MSMg01no425_f15.b1 MSMg01no425_f15.b1 CHROMAT_FILE:
MSMg01no425_f15.b1 PHD_FILE: MSMg01no425_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:33 2005
(585 letters)
>mm_chr2_25924265_25925249
Length = 985
Score = 1085 bits (561), Expect = 0.0
Identities = 576/581 (99%)
Strand = Plus / Plus
Query: 5 gaattctaatatcttcttttagtgtgcagacatacatgcagacaaaaagacccatactca 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctaatatccccttttagtgtgcagacatacatgcagacaaaaagacccatactca 264
Query: 65 tagataaataaatctttaaaaataaaaccagacttcagtttcaaaactgggcagacatca 124
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 265 tagataaataaatctttaaaaataaaaccagacctcagtttcaaaactgggcagacatca 324
Query: 125 aggatttacagaagagaacctgcactgagaaagtgtttgctcagtcaagaagtgcacatc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aggatttacagaagagaacctgcactgagaaagtgtttgctcagtcaagaagtgcacatc 384
Query: 185 gaaaccacaatgaagtcctatcctggtctttggacctagaagcagctacaaggctgtgtg 244
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 gaaaccacaatgaagtcctatcctggtctctggacctagaagcagctacaaggctgtgtg 444
Query: 245 ctggtgaaggtggaacccagcatccttgtgtagtcgtcggtgaatataaaatgagagcca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctggtgaaggtggaacccagcatccttgtgtagtcgtcggtgaatataaaatgagagcca 504
Query: 305 cttggaaaaccagcttcatggagtttccaagtaactggagtctggcagtcaagattgttc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cttggaaaaccagcttcatggagtttccaagtaactggagtctggcagtcaagattgttc 564
Query: 365 tcataaaggacactacctgaacacagtggtcttgggtcttagtaacaggttaacagggat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcataaaggacactacctgaacacagtggtcttgggtcttagtaacaggttaacagggat 624
Query: 425 gaagagcaggcagccagtaggagaggcctcacaggtggggaggtgagcgggcaactgatg 484
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gaagagcaggcagcctgtaggagaggcctcacaggtggggaggtgagcgggcaactgatg 684
Query: 485 gcaagaaggcagggtgtgtgagatacttactacctgtgcaccaaggcaagtggagcccac 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcaagaaggcagggtgtgtgagatacttactacctgtgcaccaaggcaagtggagcccac 744
Query: 545 acgtgcgtgatcttccacagaagactgtgcgccccactcct 585
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 acgtgcgtgatcttccacagaagactgtgcgccccactcct 785
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_f15.g1 MSMg01no425_f15.g1 CHROMAT_FILE:
MSMg01no425_f15.g1 PHD_FILE: MSMg01no425_f15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:46:33 2005
(417 letters)
>mm_chr2_26094387_26095203
Length = 817
Score = 721 bits (373), Expect = 0.0
Identities = 390/396 (98%), Gaps = 2/396 (0%)
Strand = Plus / Minus
Query: 1 ttgactatcagctagagacaagcgtcagccaatctccagactctctcatatcccctgaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ttgactatcagctagagacaagcgtcagccaatctccagactctctcatatcccctgaag 336
Query: 61 tttccttatccatcctgcctcagactttcttgccttctgtgtagagttgggacctgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tttccttatccatcctgcctcagactttcttgccttctgtgtagagttgggacctgaaga 276
Query: 121 tcaagctctcccgtcccaggctggccttgtccagatcctttccacatacaaactgagggt 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 tcaagctctcccatcccaggctggccttgtccagatcctttccacatacaaactgagggt 216
Query: 181 caagaagccagtcctgctgggcatggtggcacacgcctttaatcccagcactcaggaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 caagaagccagtcctgctgggcatggtggcacacgcctttaatcccagcactcaggaggc 156
Query: 241 agaggcaggcggatttctgagttcgaggccagcctggtctacagagtgagttccaggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 agaggcaggcggatttctgagttcgaggccagcctggtctacagagtgagttccaggaca 96
Query: 301 gccagggttacacagagaaactctgtctcaaaatttaaacaacgacgacgacnaagaaga 360
|||||||||||||||||||||||||||||||||||||||||||||||||||| | || ||
Sbjct: 95 gccagggttacacagagaaactctgtctcaaaatttaaacaacgacgacgacgacgacga 36
Query: 361 -agaagaagaagaagaagaagaagaagaagaagaag 395
| |||||||||||||||||||||||||||||||||
Sbjct: 35 ca-aagaagaagaagaagaagaagaagaagaagaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
