XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCCGCGGAATTC
CGTAGCATTCAGGATACCCACAGCCCCATCAGTCATCCTCCTGAGGGTAG
GAATGACAGTGAATAAAGCACTACGGCCTCTGACAACAGAAAGCTTCTTC
TCATCGTCTTTCCTGACCTCTGGTAACCTGGGCCACACATTTAACTGGCT
AGCACATCTGCCAAAGTCAGGCCTACTGGAGACTTGACCCTGTGACGTCA
ACATGCTGCCTCCCCCTAGCTGGGTGAGGTTTCTGCTTTTACAGGAAGGG
ACATGTGAAAGTGTTCTGTTTCCCACACATTCCAAAAGGAAAAAAAAAAA
CTGCCTTGGTTTTCATGCTTGTATTAGAATGCTCAAGAGGGTTAATGAGG
CCGAGCTTAAATGTAAGGGAGGCGTGTGTCTTTAATCCCAGCACTTGGAG
GCTGAGGCAGGCAGATGTCTGTATGAGTTCAACCTAGTCTACATAGTGAG
TTACAGCCAGTCCTATATCAACACTGCCATAAATAAATAATTAAATAAAT
AATTAAATAACTAACTAATTAAATAATGTGTATGGCAGGAAGCGAGGAAC
CACAATGGCGGTAACCAAGAACGGAGTTCATTTGCATATGCATGCCTGAG
TCATCCAGGCTCAACTCTCAACGCCCTAGGCATAAGCTATTCCCTTTGCC
GTGCTCCTGACCTCTTCCCTCCTT

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGTTGGAATTTCAGTGAGGATTGCATT
GAATCTGTAGATTGTTTTTGTAAGATGGCCATTTTCACTATGTTAATCCT
GTAGATCCATGAGCATGAGAGATCTTTCCATCTTCTTTGATTTCTTTCTT
CAGAGAGTTAAAGTTTTGTCATACAGAACTTACACTTGCTTGGTTAGAAT
CACACCAAAATGTTTTATATTATTTGTGACTATTGTGAAGGGTGTCATTT
CCCTAATTTCTTTCTCAACCCATTTATCCTTTGAGTAGAAAAAGGCTACT
AGTTTGTTTGAGTTAATTTTATATCCAGCCACTTTGCTGAAGTTGTTTAT
CAGCTGTAGGAGTTTCTTGTGGAATATTTGGGGTCACTTAAGTATGCAAC
TATCATCTGCAAATAGAGATACCTTGACTCCTCCTTTTCCAACTTGTATC
CCTTGATCTTCTTTTGCTGTCTAATTGCTCTAGCTCGAAGTTTTTTTTTT
TTAAAGATTTATTTATTTATTATATGTAAGCACACTGTAGCTGTCTTTAG
ACACTTCCTAATAGGGCTTCGCATCTTGTTACTGATGGCTGTTACTCCCC
ATGTGGTTGTCTGGAATTGGAATATTTGGTCCCTTGCCAATAACTGTCTG
CTGCTTCCTTTCCCCTTGGTTTT

Query= MSMg01no425_m02.b1 MSMg01no425_m02.b1 CHROMAT_FILE:
MSMg01no425_m02.b1 PHD_FILE: MSMg01no425_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:03 2005
         (471 letters)



>mm_chr2_20296445_20297315
          Length = 871

 Score =  888 bits (459), Expect = 0.0
 Identities = 468/471 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acccacagccccatcagtcatcctcctgagggtaggaatgacagtgaataaagcactacg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 acccacagccccatcagtcatcctcctgagggtaggaatgacagtgaataaagcactacg 493

                                                                       
Query: 61  gcctctgacaacagaaagcttcttctcatcgtctttcctgacctctggtaacctgggcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gcctctgacaacagaaagcttcttctcatcgtctttcctgacctctggtaacctgggcca 433

                                                                       
Query: 121 cacatttaactggctagcacatctgccaaagtcaggcctactggagacttgaccctgtga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 cacatttaactggctagcacatctgccaaagtcaggcctactggagacttgaccctgtga 373

                                                                       
Query: 181 cgtcaacatgctgcctccccctagctgggtgaggtttctgcttttacaggaagggacatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cgtcaacatgctgcctccccctagctgggtgaggtttctgcttttacaggaagggacatg 313

                                                                       
Query: 241 tgaaagtgttctgtttcccacacattccaaaaggaaaaaaaaaaactgccttggttttca 300
           ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 tgaaagtgggctgtttcccacacattccaaaaggaaaaaaaaaaactgccttggttttca 253

                                                                       
Query: 301 tgcttgtattagaatgctcaagagggttaatgaggccgagcttaaatgtaagggaggcgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tgcttgtattagaatgctcaagagggttaatgaggccgagcttaaatgtaagggaggcgt 193

                                                                       
Query: 361 gtgtctttaatcccagcacttggaggctgaggcaggcagatgtctgtatgagttcaacct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gtgtctttaatcccagcacttggaggctgaggcaggcagatgtctgtatgagttcaacct 133

                                                              
Query: 421 agtctacatagtgagttacagccagtcctatatcaacactgccataaataa 471
           ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 132 agtctacatagtgagttacagccagtcctatatcaacactgtcataaataa 82


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space:   396921
Effective search space used:   396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)