Query= MSMg01no425_p07.b1 MSMg01no425_p07.b1 CHROMAT_FILE:
MSMg01no425_p07.b1 PHD_FILE: MSMg01no425_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:19 2005
(359 letters)
>mm_chr2_110705635_110706393
Length = 759
Score = 638 bits (330), Expect = 0.0
Identities = 348/354 (98%), Gaps = 2/354 (0%)
Strand = Plus / Minus
Query: 5 gaattctcatagatgtcagtcccagcttcagcaacagggcagccatttgtgtgattgttt 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gaattctcatagaagtcagtcccagcttcagcaacagggcagccatttgtgtgattgttt 498
Query: 65 ttgagcttatcctttgactagacaattatgcaaatattttgtttgaccaaatttgaagat 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 497 ttgagcttatcctttgactagacaattatgcaaatattttgtttgaccaaatttgaggat 438
Query: 125 cactaaaaatgcaaatttttaagtggtaaaaatttttgtgggggaattcatggaatggtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cactaaaaatgcaaatttttaagtggtaaaaatttttgtgggggaattcatggaatggtg 378
Query: 185 ggtatttcctcccattctgagggagggacaatattgtaggagaatcccacactgcctcac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggtatttcctcccattctgagggagggacaatattgtaggagaatcccacactgcctcac 318
Query: 245 ccctgccatgggccagtacaggaaggagcaaagccctgagggtctttagtcttccttaat 304
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 317 ccctgccatgggccagtacaggaaggagcaaagccctgagagtctttagtcttccttaat 258
Query: 305 ctaagagggcaggtacagagggaca-caacgtggtgcttggggggggggcgagg 357
||||||||||||||||||||||||| || |||| ||||||||||||||||||||
Sbjct: 257 ctaagagggcaggtacagagggacatca-cgtgatgcttggggggggggcgagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no425_p07.g1 MSMg01no425_p07.g1 CHROMAT_FILE:
MSMg01no425_p07.g1 PHD_FILE: MSMg01no425_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:19 2005
(467 letters)
>mm_chr2_110675551_110676417
Length = 867
Score = 903 bits (467), Expect = 0.0
Identities = 467/467 (100%)
Strand = Plus / Plus
Query: 1 aaatttaaattagagaactgcagtttcttctcaatatcaaagactattatgttcatgtag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatttaaattagagaactgcagtttcttctcaatatcaaagactattatgttcatgtag 260
Query: 61 caaaatctctacagcatcaatacctagatgtttctatgaacacttggtctggagacccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaatctctacagcatcaatacctagatgtttctatgaacacttggtctggagacccag 320
Query: 121 gaagcacctctcaaaattctctgtttgtgtgtgtctgtatacaataggtggaccagatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagcacctctcaaaattctctgtttgtgtgtgtctgtatacaataggtggaccagatgc 380
Query: 181 ccaccgaggccaaaggaatttttcatatcccctggaaatggaattaacagaggttgtaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaccgaggccaaaggaatttttcatatcccctggaaatggaattaacagaggttgtaaa 440
Query: 241 tcacttgaaatgtggaaaataactatacttttcttcaagagcaagatgtatgttttaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcacttgaaatgtggaaaataactatacttttcttcaagagcaagatgtatgttttaatg 500
Query: 301 gctgagccacctctatggccttagcggtagaaaatttttgttagctgccatagagtatag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gctgagccacctctatggccttagcggtagaaaatttttgttagctgccatagagtatag 560
Query: 361 taagctagccaattaaggaatgatgctaatgtaaaccagaggaaaaggaagcatcaatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagctagccaattaaggaatgatgctaatgtaaaccagaggaaaaggaagcatcaatat 620
Query: 421 ttattgtgtaatccatccataattttatcatatttcacatgaggagc 467
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttattgtgtaatccatccataattttatcatatttcacatgaggagc 667
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
