XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTTTT
TATTACCTACAATAATTATCCTGGGGAGCCATGCAACCACGGCAACTTAA
CTTTCTTTTCAGTTGAAACTACTACTAATTAGTACAGCGTATAACGGCCG
CAATGATGGGATACTTACATTGCATCAAGAGCTGTATTAGGCATAGTACA
TGTGATTAAAGTTATTAATCACAGAAGATTTAAGTAACTCTTACATGAAA
AGCATCATTCCAGATGCTGTGGATATCGCTTCTTTTCTTTTTCCTTAGTA
CTGCAGAGGGGAACCAGGATTTTGTGTGTGTCGGGTAACTGTTCCACTAC
TGAATTATATCTTCAGTCCTTTATTGTATTTGATCTCAGGAAGGGAGCAC
TAATCTATCTTATTTCGTCAGGAGGAAACTGGTATTCAGAAGGTTGTTAA
GGTTGTTGGCTCACTTGTACAAGATCTCCCAAGAGAGAAGATGAGCCAAA
ACTGATTCATTCTGAACCTCTTACTACAACATTAAGAATAACTGTTACAT
GAAATAGATTGTGGTAGGAAATTTGAAATACATTTGAAATTCAGTCCTGT
TAGAACACTATTGGCTGACTGTGCATCACAAAAACATATTGTGTATCTCA
AAAAACACTTTCTTTTGAAAAAAGGATAATGTTTGTTGAAAAAGAACCTT
TTCTCCCCATTTTATAACCAGGGAACAAAATGTCCCCCCACTTTTTTGGT
TTATATATAACG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTTTTAATGGGGTTA
TTTGATTTTCTGAAGTCCACCTTCTTGAGTTCTTTATATATGTTGGATAT
TAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCCTCCCACTATTACTT
TGTGAGGTGCAATGTATGCTTTGAGCTTTACTAAAGTTTCTTTAATGAAT
GTGAGTGCCCTTGTATTTGGAGCATAGATATTCAGAATTGAGAGTTCATC
TGGGTTAATTTTACCTTTAATGAGTATGAAGTGCCCCTCCTTGTCTTTTT
TGATAACTTTGAGTTGGAAGTCTATTTTATTCGATATTAGXXXXXXXXXX
XXXXXXXXXXXXXXXXXXCTGTTTGCTTGGAAAATTGTTTCCCAGCCTTT
TACTCTGAGGTAGTATCTGTCTTTGTCCCTGAGGTGGGTTTCCTGTGTGC
GGCAAAATGTTGGGTCCTGTTTATGTATGCAGTCTGTTAATCTATGTCTT
TTTATTTGGTAAATGAGTCCCTTGATATTAAGACAATTTAGGGTACAGTT
CTTGGGGGTTCTTGCTTTTTTCGTCCCCCAAATCAGACATCTTGTTCTTT
GTGCGGCCCTCTTTAATCTTCTGCTATTTATCCATTCCCCTCTTCCTCAA
CTTTTTTTTCTCTTTATTTTTCCTTCTCTTTTCCCCTATTTTTTATCCAT
AACTTTG

Query= MSMg01no425_p14.b1 MSMg01no425_p14.b1 CHROMAT_FILE:
MSMg01no425_p14.b1 PHD_FILE: MSMg01no425_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:47:20 2005
         (523 letters)



>mm_chr2_139452882_139453804
          Length = 923

 Score =  920 bits (476), Expect = 0.0
 Identities = 509/520 (97%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattctgtttttattacctacaataattatcctggggagccatgcaaccacggcaact 63
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ggaattctgtttttattaactacaataattatcctggggagccatgcaaccacggcaact 664

                                                                       
Query: 64  taactttcttttcagttgaaactactactaattagtacagcgtataacggccgcaatgat 123
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 663 taactttcttttcagttgaaactactactaattagtacagcgtataatggccgcaatgat 604

                                                                       
Query: 124 gggatacttacattgcatcaagagctgtattaggcatagtacatgtgattaaagttatta 183
           |||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 603 gggatacttacattacattaagagctgtattaggcatagtacgtgtgattaaagttatta 544

                                                                       
Query: 184 atcacagaagatttaagtaactcttacatgaaaagcatcattccagatgctgtggatatc 243
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 543 atcacagaagatttaagtaactcttacatgaaaagcatcattccagacgctgtggatatc 484

                                                                       
Query: 244 gcttcttttctttttccttagtactgcagaggggaaccaggattttgtgtgtgtcgggta 303
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gcttcttttctttttctttagtactgcagaggggaaccaggattttgtgtgtgtcgggta 424

                                                                       
Query: 304 actgttccactactgaattatatcttcagtcctttattgtatttgatctcaggaagggag 363
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 423 actgttccactactgaattatatcttcagtcctttattgtatttaatctcaggaagggag 364

                                                                       
Query: 364 cactaatctatcttatttcgtcaggaggaaactggtattcagaaggttgttaaggttgtt 423
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 cactaatctatcttattttgtcaggaggaaactggtattcagaaggttgttaaggttgtt 304

                                                                       
Query: 424 ggctcacttgtacaagatctcccaagagagaagatgagccaaaactgattcattctgaac 483
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 ggctcacttgtacaagatttcccaagagagaagatgagccaaaactgattcattctgaac 244

                                                   
Query: 484 ctcttactacaacattaagaataactgttacatgaaatag 523
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttcttactacaacattaagaataactgttacatgaaatag 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 523
Length of database: 923
Length adjustment: 10
Effective length of query: 513
Effective length of database: 913
Effective search space:   468369
Effective search space used:   468369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)