Query= MSMg01no426_h06.b1 MSMg01no426_h06.b1 CHROMAT_FILE:
MSMg01no426_h06.b1 PHD_FILE: MSMg01no426_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:00 2005
(465 letters)
>mm_chr2_128523104_128523968
Length = 865
Score = 841 bits (435), Expect = 0.0
Identities = 456/463 (98%), Gaps = 2/463 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaagtccagtctaggtagcatagcaagaccctgtctgtcctacgtagatttcta 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaagtccagcctaggtagcatagcaagaccctgtctgtcctacgtagatttcta 263
Query: 64 ttgttgtgatgaccaaaagctacttgggaatttatttcagcttacaattgaaatgcatca 123
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 264 ttgttgtgatgaccaaaagctacttgggaatttatttcagcttacagttgaaatgcatca 323
Query: 124 tgaaggaaagtcagaacaggaattcgaggcaggaacctggaggccagaacttaagcacaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgaaggaaagtcagaacaggaattcgaggcaggaacctggaggccagaacttaagcacaa 383
Query: 184 accatagaggaactgcttactggcttgctcagcttgctttcttatacatccctaga-tga 242
||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||
Sbjct: 384 accatagaggaactgcttactggcttgctcagcttgctttcttatgcatccct-gaatga 442
Query: 243 cctacccaggaatggcaccatccacagtaaactgggctctttcacatcaagcaccaatca 302
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctacccgggaatggcaccatccacagtaaactgggctctttcacatcaagcaccaatca 502
Query: 303 agggtctgtttaatccagcgcttctggtttgatgtcctcctgcagggctagagatgcaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agggtctgtttaatccagcgcttctggtttgatgtcctcctgcagggctagagatgcaag 562
Query: 363 gagcttattgtatcacagtgcgtatgggtctgtcctcagtttcagtaataaatactttaa 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gagcttattgtatcacagtgcgtatgggtctgtcctcagtttcagtaataaatactttaa 622
Query: 423 atttatcagggtggtttactctgggctctaatgcgatcttatc 465
||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 623 atttatcagggtggtttactctgggctctaatgtgatcttatc 665
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space: 389025
Effective search space used: 389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no426_h06.g1 MSMg01no426_h06.g1 CHROMAT_FILE:
MSMg01no426_h06.g1 PHD_FILE: MSMg01no426_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:00 2005
(477 letters)
>mm_chr2_128684128_128685004
Length = 877
Score = 451 bits (233), Expect = e-131
Identities = 276/307 (89%), Gaps = 26/307 (8%)
Strand = Plus / Minus
Query: 1 catatatgacactgtacttacatcatttctattctacattcccccacttccaactcctcc 60
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 307 catatatgatactgtacttacatcatttctattctacattccccgacttccaactcctcc 248
Query: 61 tgtgcccccaacccttttcaaatttatgatctcttttttattacttttatgtatatttat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tgtgcccccaacccttttcaaatttatgatctcttttttattacttttatgtatatttat 188
Query: 121 atatacacacaaacacaacctgcttggtccatttagtgttgcttgtatgtatatgtgttt 180
|||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||
Sbjct: 187 atatacacacaaacacaacctgcttggtccatttagtgttgcgtgtatgtacacgtgttt 128
Query: 181 aaggctgtttgggactggataccctctccagagtctcatccttgg--------------- 225
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aaggctgtttgggactggataccctctccagagtctcatccttggaggagactgatttcc 68
Query: 226 -----------agccattacttgcctgtagtcctttatctaatggtagagtcttgtgaga 274
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 cttctctcagtagccattacttgcctgtagtcctttatctaatggtagagtcttgtgaga 8
Query: 275 atttccc 281
|||||||
Sbjct: 7 atttccc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
