Query= MSMg01no426_j14.b1 MSMg01no426_j14.b1 CHROMAT_FILE:
MSMg01no426_j14.b1 PHD_FILE: MSMg01no426_j14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:12 2005
(254 letters)
>mm_chr2_132428137_132428790
Length = 654
Score = 476 bits (246), Expect = e-139
Identities = 252/254 (99%)
Strand = Plus / Plus
Query: 1 acacatataacttataactaaagttaccatggaacttagcacacgggaagttttggttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacatataacttataactaaagttaccatggaacttagcacacgggaagttttggttat 260
Query: 61 tcatatgtatatacctgtctgcatgtgttttccttaaaggcaacttagggcatggagggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcatatgtatatacctgtctgcatgtgttttccttaaaggcaacttagggcatggagggc 320
Query: 121 tggagggaaagagtttgtttggtttatacttccaggtcatagttcactaatgagggaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggagggaaagagtttgtttggtttatacttccaggtcatagttcactaatgagggaaac 380
Query: 181 tagggcatgtactcgaggaggaacttgatgcagaaaccatggaggaatattgctgactta 240
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagggcagggactcgaggaggaacttgatgcagaaaccatggaggaatattgctgactta 440
Query: 241 ctcacaggtttgta 254
||||||||||||||
Sbjct: 441 ctcacaggtttgta 454
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no426_j14.g1 MSMg01no426_j14.g1 CHROMAT_FILE:
MSMg01no426_j14.g1 PHD_FILE: MSMg01no426_j14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:48:12 2005
(492 letters)
>mm_chr2_132602361_132603252
Length = 892
Score = 824 bits (426), Expect = 0.0
Identities = 447/454 (98%), Gaps = 1/454 (0%)
Strand = Plus / Minus
Query: 39 accaagatttaagaaaaatcacgattttgcccacggcttctgaaatgactagcctggaaa 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892 accaagatttaagaaaaatcacgattttgcccacggcttctgaaatgactagcctggaaa 833
Query: 99 atgaaaccaacaaagggaatttgatactgaaaataatacacagggactagaaaaacagag 158
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 832 atgaaaccaacaaagggaatttgatactgaaaataatacaca-ggactagaaaaacagag 774
Query: 159 agaacagggaatgaagttgagaaaacccagaggttggcaaatgcaggtagctgctacctc 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 agaacagggaatgaagttgagaaaacccagaggttggcaaatgcaggtagctgctacctc 714
Query: 219 cctggggatggaaggatatagccaccctgcagtccttaaacagaggctgcttaaaaaggc 278
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 713 cctggggatggaaggatatagccaccctgcagtccagaaacagaggctgcttaaaaaggc 654
Query: 279 acgagctggggcctgggtggaaaaggcttctgggtaacagctggcaacaagggacgctgt 338
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 653 acgagctggggcctgggtggaataggcttctgggtaacagctggcaacaagggacgctgt 594
Query: 339 cactgccagagatataatgacttcctttcaaggagggggaagggaagaaatacttagctt 398
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 cactgccagagatgtaatgacttcctttcaaggagggggaagggaagaaatacttagctt 534
Query: 399 tttcttcttttcaaggctagtgccccttagcaaccgaagctacctggaaaccaggaaaag 458
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 533 tttcttcttttcaaggctagtgccccttagcaaccaaagctacctggaaaccaggaaaag 474
Query: 459 catttactagggccagtctccccagcaagacagg 492
||||||| ||||||||||||||||||||||||||
Sbjct: 473 catttacaagggccagtctccccagcaagacagg 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 892
Length adjustment: 10
Effective length of query: 482
Effective length of database: 882
Effective search space: 425124
Effective search space used: 425124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
