GCCCTTTACATTATTTTCTCACCCAACACACCNNNNNNNNNNNNNNNNNN
NNNNNTCCCAGCGTATCGAGACCNCCAGCCCAATAAGGGTCGCCTTCCTA
TCCCCCCTCCCCTCNTNCTTCTACACTCTTTCCTTCCTTTCTTCCCTCTT
TTCTTTCCCTTTCTTCCAATAAACTCCTATATTCTACTCTTTACCTATTT
TCTACATGTTTCCAGTTTTCTCCCAACTAAACAATTATTAATTTATTACC
TATNTTTCACTGTTAACCTATTTTTCACGACCCATCGTCTCGCGCCCCCT
CCCACATACCCCCAAACCCGTCTACACATCCCTTCGCTAATATATTCCCT
AAATTTTATACTAAACTAACTATATACCCCCCACCCCCCTCACCCTCCCC
CCTCTATCTCAAACTAATTACTCTTCGTCCCCCTACCACACCGCACTTAC
CAAACTAACACCGTCAAATTTTTGCCCTCACGCTCACATTCCACATCTTA
TCGCGATCACATAACTACACGACACCCTCTTTAACACCCCCATTACCCCT
CCCCTCCCCTTCCTCCGCTCCATTTCACCTCCCACTATACAACATAACCT
CCCCGTCCATCTACCTCATCACTTATCTATCCCTCCTCCTTCTTCTACCT
ATACTTTTACATCTCANATTACCGATTATATATCTCATCACTCTTCGACT
ACACTCATACACCATCTCACTCTCCCCCATCACCTACATAAAATATAAAT
CATCATCACGCCTACTCCCTCATAAAATAATACCTCAAATACTCTCTCAC
CTAATACAATATACCACACCATCATCAATAAAATTATACAACCCTCACTA
TCCCCACTCCTACCCCACCCCAACACACTACCCATCACTCTTTCACTCGC
ATAACCTAAACAATAACATTCTCTCCGTCCTCATTGTATCTCATCATCTA
TTTCTAACTCTCCTCTCTAATAACTCTATCTTCACATACCAATCGAACTT
NTATACATCCATATTTTATAACTCTACCTTATACACCTCTCTCATTACCC
CTCTCACCCCACTTCCTCTCTCTCTCTCCTACCTCTTACGTCAANCAAAA
CATCACAATCTATACACACACGTATATCTCATCACTCTTCTATTACANAA
NAATACCACAACAATAGCTCTTATATACACATCACACTACATATTTCCTA
CAAACAGATCATACAATCTTATCACTACACTCAACACACCGTCAATATCC
CTCATATCTCCTCATCCACTCCTCACACTCCG

NNNTTCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAACCACTTGGGTGACTCC
AAGCACACTACAGCCTCTCTATGTTCTTATTTTTCATTAGAAAACATTTT
GTAAAGTATTATAAATAACAATGCTTATTATCTAATCATATGTGGTAGAC
GTATCAGTAAGGTTGCTAAGTAGAAAAGAAATATTGGTAGTAAACCTTAT
AGGTTACCAGTCCATGATCTAAGACATTGTTTGTAATCCTTCATCTATTC
ATTTAACCCTTGAGAAATACCAGTTCTGCTTTATATCAACATATTTGAGA
GTCTGTGCACAGAAATCTCTGCCGAAAGCTTGTAACAACTGTGAAAAAAC
ATTGATCATTAATGTTAGTTTAAATTCAAAATAAAAAGTAATGATCTTTT
GTTAAGATACACACATGGAATATTAAAGATGTGTATATGTGTATGTATGT
GTCCTCTCACATGTTTGGTGTGTGTGTGCAATAGAAAAAAAAAGAGAGAA
ATTTAGATATATTCTCTTGTATAGGAAAAATCGAACAAATTGGAAACCTC
CAAAATATTGAAATGTTGAAAGAATTATGTAATATCAAAGTAACCACTTT
TTAAAAATTATGTTTTTTAATGACTAAGCATTGTTCTTTAGGGTACTTTT
GTTTTACCACAATGAAGAGGGAATTCCCATACGCCCTGC

Query= MSMg01no427_d02.g1 MSMg01no427_d02.g1 CHROMAT_FILE:
MSMg01no427_d02.g1 PHD_FILE: MSMg01no427_d02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:00 2005
         (605 letters)



>mm_chr2_45592661_45593665
          Length = 1005

 Score = 1112 bits (575), Expect = 0.0
 Identities = 603/625 (96%), Gaps = 20/625 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   taaccacttgggtgactccaagcacactacagcctctctatgttcttatttttcattaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 taaccacttgggtgactccaagcacactacagcctctctatgttcttatttttcattaga 588

                                                                       
Query: 61  aaacattttgtaaagtattataaataacaatgcttattatctaatcatatgtggtagacg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 aaacattttgtaaagtattataaataacaatgcttattatctaatcatatgtggtagacg 528

                                                                       
Query: 121 tatcagtaaggttgctaagtagaaaagaaatattggtagtaaaccttataggttaccagt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 tatcagtaaggttgctaagtagaaaagaaatattggtagtaaaccttataggttaccagt 468

                                                                       
Query: 181 ccatgatctaagacattgtttgtaatccttcatctattcatttaacccttgagaaatacc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 ccatgatctaagacattgtttgtaatccttcatctattcatttaacccttgagaaatacc 408

                                                                       
Query: 241 agttctgctttatatcaacatatttgagagtctgtgcacagaaatctctgccgaaagctt 300
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 407 agttctgctttatatcaacatattttagagtctgtgcacagaaatctctgccgaaagctt 348

                                                                       
Query: 301 gtaacaactgtgaaaaaacattgatcattaatgttagtttaaattcaaaataaaaagtaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gtaacaactgtgaaaaaacattgatcattaatgttagtttaaattcaaaataaaaagtaa 288

                                                                       
Query: 361 tgatcttttgttaagatacacacatggaatattaaagatgtgtatatgtgtatgtatgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tgatcttttgttaagatacacacatggaatattaaagatgtgtatatgtgtatgtatgtg 228

                                                                       
Query: 421 tcctctcacatgtttggtgtgtgt--------------------gtgcaatagaaaaaaa 460
           ||||||||||||||||||||||||                    ||||||||||||||||
Sbjct: 227 tcctctcacatgtttggtgtgtgtgtgtgtgtgcatgtgtgtgcgtgcaatagaaaaaaa 168

                                                                       
Query: 461 aagagagaaatttagatatattctcttgtataggaaaaatcgaacaaattggaaacctcc 520
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aagagagaaatttagatatattctcttgtataggaaaaatcgaacaaattggaaacctcc 108

                                                                       
Query: 521 aaaatattgaaatgttgaaagaattatgtaatatcaaagtaaccactttttaaaaattat 580
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 aaaatattgaaatgttgaaagaattatgtaatatcaaagtaaccactttttaaaaattat 48

                                    
Query: 581 gttttttaatgactaagcattgttc 605
           |||||||||||| ||||||||||||
Sbjct: 47  gttttttaatgaataagcattgttc 23


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)