NNAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCCTGATGACAATAGAATTATGTTTCTGGAATTCATTTGCA
CTGCCTTCTATACAGTCACAGCCTTCACTGTGTCTAAGTTCAGTTAGCTG
AGGAATCGATTCACTTAGATGGGATTTATGAAATTGTGCCTTGAGAAAAT
TAATTTCTCATCGAGGATATCTAAGAGTGGACCTATGATTGCTGTGGTCT
GCATGTAATAATAAAAAGTGCATGGCAATGAAAGATTTTAATTCTAGTCT
GATATGAGACAGCTTCAAGGTTCTTCATAGTTTTAGAATTACTATTTGAA
TCAGCTGAGGCTGCCAGTGAACTGCATGGATACTCAATTCCTTCTGCTAT
CCAATCTAGCTACATTTCTTTCACCTCCATATGAATATTAATTCCAAAAG
TTTTTAATTGTACTGGACTGAATGTGATTTTCCTGTCCTCTGGGACTCTT
GTTGTAATTTGTCTGGCATTGTAATAGTGTTGGAAAGTAGAGCCTTTAAG
AGGTCATTAATGTCTGGGATAGGCAAACATGCTTATGGAGGTGTCTGTGG
GGCTATTTCTTTCCTTTTGGGCGGGGGAGGGCAAAACTCCATTTTAATTG
TTCAAAATCCTTAAACATCAAGGAAATATAAATAAAAATTGCTTTCAGAA
TTTACCCCTTCCCAAGCCGAATGGATAACCTCCAAAAAACAAGAAG

NNNACAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTTAATGAGTGGTTGTGGA
GAGGCCTCAACCCGTTGTGAGTGGTGACATCTCTGGGCTGGTGGCCCTGG
GTTCTATAAAATGGCAGGCTGTGGTGATTTGAATACATTTAGCTCCCATA
AATTCCTTTGTTTGAATGCTTGGCCATAGGGAGTGGCACAATTAGGAGGT
GTGGCTTTTTTGGAGGAGGTATGACCTTGTTACAGGAAGCGTGTCACTAC
ATAAGCGGGCTTTGAGGTCTTCTATGCTTAGGCTCTCTCTCCAGTCTGGA
ATCTAGTCTCCACCTGGCTGCCTTCACATCAGGATGTAGAACTCTCAGCT
CCTTCAACATGCTGCAATGCTTCCCTCCATGATGATAATGGACTGGACCT
CTGAAACTGTAAGCCACCCCCAATTAAATATTCGCCTTTATAAGAGTCGC
CTTGGTCATGGTGTCTCTTCCCAGCAATGGAAACCTAAACTGAGACACAG
ACTGAACTCGCCATGAGGAGCAGGCCTCTGCATCAGCTCCTGTCTCCAGG
TTCCTGTCCTGTTTGAGTTCCTATCCTGACTTTCTTCATTAATGAAAAGT
GCTGTGGAAATGTTAGCCACAGACACCCTTTCTTGCCCAAGTTGTTTTGG
CCATTTGAACCCCTTGACAGCAGTAATCCTCCTAACTAGGCCAACTTTTA
AAG

Query= MSMg01no427_f10.b1 MSMg01no427_f10.b1 CHROMAT_FILE:
MSMg01no427_f10.b1 PHD_FILE: MSMg01no427_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:11 2005
         (545 letters)



>mm_chr2_83957922_83958866
          Length = 945

 Score = 1038 bits (537), Expect = 0.0
 Identities = 540/541 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcctgatgacaatagaattatgtttctggaattcatttgcactgccttctatac 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaattctcctgatgagaatagaattatgtttctggaattcatttgcactgccttctatac 686

                                                                       
Query: 65  agtcacagccttcactgtgtctaagttcagttagctgaggaatcgattcacttagatggg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agtcacagccttcactgtgtctaagttcagttagctgaggaatcgattcacttagatggg 626

                                                                       
Query: 125 atttatgaaattgtgccttgagaaaattaatttctcatcgaggatatctaagagtggacc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atttatgaaattgtgccttgagaaaattaatttctcatcgaggatatctaagagtggacc 566

                                                                       
Query: 185 tatgattgctgtggtctgcatgtaataataaaaagtgcatggcaatgaaagattttaatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatgattgctgtggtctgcatgtaataataaaaagtgcatggcaatgaaagattttaatt 506

                                                                       
Query: 245 ctagtctgatatgagacagcttcaaggttcttcatagttttagaattactatttgaatca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctagtctgatatgagacagcttcaaggttcttcatagttttagaattactatttgaatca 446

                                                                       
Query: 305 gctgaggctgccagtgaactgcatggatactcaattccttctgctatccaatctagctac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gctgaggctgccagtgaactgcatggatactcaattccttctgctatccaatctagctac 386

                                                                       
Query: 365 atttctttcacctccatatgaatattaattccaaaagtttttaattgtactggactgaat 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atttctttcacctccatatgaatattaattccaaaagtttttaattgtactggactgaat 326

                                                                       
Query: 425 gtgattttcctgtcctctgggactcttgttgtaatttgtctggcattgtaatagtgttgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgattttcctgtcctctgggactcttgttgtaatttgtctggcattgtaatagtgttgg 266

                                                                       
Query: 485 aaagtagagcctttaagaggtcattaatgtctgggataggcaaacatgcttatggaggtg 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaagtagagcctttaagaggtcattaatgtctgggataggcaaacatgcttatggaggtg 206

            
Query: 545 t 545
           |
Sbjct: 205 t 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 545
Length of database: 945
Length adjustment: 10
Effective length of query: 535
Effective length of database: 935
Effective search space:   500225
Effective search space used:   500225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)