Query= MSMg01no427_p19.b1 MSMg01no427_p19.b1 CHROMAT_FILE:
MSMg01no427_p19.b1 PHD_FILE: MSMg01no427_p19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:01 2005
(499 letters)
>mm_chr2_60344391_60345290
Length = 900
Score = 781 bits (404), Expect = 0.0
Identities = 467/500 (93%), Gaps = 23/500 (4%)
Strand = Plus / Plus
Query: 4 ggaattctccaaatattc--tcagacaaatccttagcctgactgaaaaagaaaaagttca 61
||||||||||||||| | | |||||||||||||||| |||||||||||||||||||||
Sbjct: 204 ggaattctccaaata--caat-agacaaatccttagcccgactgaaaaagaaaaagttca 260
Query: 62 ggtaaaaccagagatggaaaggaagatgttggcactttggggtaacacggtaaactaaag 121
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gataaaaccagagatggaaaggaagatgttggcactttggggtaacacggtaaactaaag 320
Query: 122 gctatctctgtaaaagctgcagtttgacagctcagagctctgaagccaccatctgtaagt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gctatctctgtaaaagctgcagtttgacagctcagagctctgaagccaccatctgtaagt 380
Query: 182 cactggggtagagactgagaattctgaagtccagaaggtgtgt--gtgatacccaccaca 239
|||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 cactggggtagagagtgagaattctgaagtccagaaggtgtgtatgtgatacccaccaca 440
Query: 240 ctgtccctccagcaggctcactaacactgtggtggtttgaatgagaatggcccccccata 299
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtccctccagcaggctcactaacactgtggtggtttgaatgagaat------------ 488
Query: 300 gaatttatgcctggtccccagttggtagaactgtttgggaagaatgaggaggtgtggctt 359
|||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 489 ----ttatgcttggtccccagttggtggaactgtttgggaagaatgaggaggcgtggctt 544
Query: 360 tgttggaggacgtgtttcattgggagtaggctctgaagtttcaaagcctcctattattct 419
|||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 545 tgttggaggacgtgtttcattgggggtaggctctgaagtttcaaaacctcctattattct 604
Query: 420 tagtgtgccctctctgcttcctatttatctaggtcaagaactctcagctgtccctgctac 479
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 605 tagggtgccctctctgcttcctatttatctaggtcaagaactctcagctgtccctgccac 664
Query: 480 catatctttgcattgttatc 499
||||||||||||||||||||
Sbjct: 665 catatctttgcattgttatc 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 900
Length adjustment: 10
Effective length of query: 489
Effective length of database: 890
Effective search space: 435210
Effective search space used: 435210
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no427_p19.g1 MSMg01no427_p19.g1 CHROMAT_FILE:
MSMg01no427_p19.g1 PHD_FILE: MSMg01no427_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:01 2005
(511 letters)
>mm_chr2_60518504_60519414
Length = 911
Score = 830 bits (429), Expect = 0.0
Identities = 435/437 (99%)
Strand = Plus / Minus
Query: 75 aatgctgttatcatttaatggtaaagataataaaagaggtcttgaagcagaagttggtaa 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 aatgctgttatcatttaatggtaaagataataaaagaggtcttgaagcagaagttggtaa 852
Query: 135 ttgtagagcttgtgaaatgtacttagtaccactggattatattataattaatgatacata 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 ttgtagagcttgtgaaatgtacttagtaccactggattatattataattaatgatacata 792
Query: 195 ttcattgtcactggatatatacttaaaaatgtttcaagtggtaccttgtttgctgtgtat 254
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ttcattgtcactggatatatacttaaaaatgtttcaagtggtaccttgtttgctgtgtat 732
Query: 255 attataccataatttaaaaatacatatataactcttacctaaactgtatggtctaggtca 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 attataccataatttaaaaatacatatataactcttacctaaactgtatggtctaggtca 672
Query: 315 agaggcagtttgtgcttaatacatgtggacattgtgcccacaatgtgaggatggcaagaa 374
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 671 agaggcagtttgtgcttaatacatgtggacattgttcccacaatgtgaggatggcaagaa 612
Query: 375 gactaaacatatccctttttaaaaacaattttcttaaaggtcttgaaattcaagacaaag 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 gactaaacatatccctttttaaaaacaattttcttaaaggtcttgaaattcaagacaaag 552
Query: 435 atatccacttccagattccacgactctgtgttacccacacacaaatgagcatagatatct 494
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 551 atatccacttccagattccacgactctgtgttacccacacacaaatgagcgtagatatct 492
Query: 495 gcaaacaattcctctgc 511
|||||||||||||||||
Sbjct: 491 gcaaacaattcctctgc 475
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
