Query= MSMg01no429_a18.b1 MSMg01no429_a18.b1 CHROMAT_FILE:
MSMg01no429_a18.b1 PHD_FILE: MSMg01no429_a18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:24 2005
(359 letters)
>mm_chr2_68861122_68861880
Length = 759
Score = 576 bits (298), Expect = e-169
Identities = 319/326 (97%), Gaps = 1/326 (0%)
Strand = Plus / Plus
Query: 31 gaattccttccttgaccgattgaatggaatacgcagtatacttaaactataggaaatatt 90
||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 231 gaattccttccatgagcgattgaatggaatgcgcagtatacttaaactataggaaatatt 290
Query: 91 gtatgttccactagcaagtgaagttattccataccccacccccataatagccctgatgtc 150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gtatgttccactagcaagtgaagttattccataccccacccccataatagccctgatgtc 350
Query: 151 ctgtaactggctcttcctttctctgagcactcattactttctcacatcatataatttact 210
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ccgtaactggctcttcctttctctgagcactcattactttctcacatcatataatttact 410
Query: 211 ttatctggcagtttattttttttttaatttttatctttaattgctctggtgaggcaaata 270
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 411 ttatctgacagtttattttttttt-aatttttatctttaattgctctggtgaggcaagta 469
Query: 271 tctgtgtgttgattgtcatcaacatacctacaatagtgactggcagggtcacttaaattc 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tctgtgtgttgattgtcatcaacatacctacaatagtgactggcagggtcacttaaattc 529
Query: 331 ttatagattatgtcacttgctctata 356
||||||||||||||||||||||||||
Sbjct: 530 ttatagattatgtcacttgctctata 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_a18.g1 MSMg01no429_a18.g1 CHROMAT_FILE:
MSMg01no429_a18.g1 PHD_FILE: MSMg01no429_a18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:24 2005
(419 letters)
>mm_chr2_68996943_68997761
Length = 819
Score = 787 bits (407), Expect = 0.0
Identities = 416/419 (99%)
Strand = Plus / Minus
Query: 1 tctagcttcacagatcaagtcacaatctctctagaaggattaatgtgttctttcctgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tctagcttcacagatcaagtcacaatctctctagaaggattaatgtgttctttcctgcat 560
Query: 61 ttgttatctagccaactagatttttaagtaattgaaaactagccgcagatcttagtgtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ttgttatctagccaactagatttttaagtaattgaaaactagccgcagatcttagtgtag 500
Query: 121 tatgtacagaagctagactgtgtgctgttgtagaatcaacacgtgtattccctttgacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tatgtacagaagctagactgtgtgctgttgtagaatcaacacgtgtattccctttgacgt 440
Query: 181 caccacactccttacaataacctctccattgcagggtctctaacaaccttacacaaatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 caccacactccttacaataacctctccattgcagggtctctaacaaccttacacaaatgg 380
Query: 241 agaaccaaactggtgtttgttacttttcctaaattgtaaactccacagagaggcagccaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agaaccaaactggtgtttgttacttttcctaaattgtaaactccacagagaggcagccaa 320
Query: 301 tattgctggaacagagcagtgactccagagtctaagaacttctaagacttcatggtttaa 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tattgctgggacagagcagtgactccagagtctaagaacttctaagacttcatggtttaa 260
Query: 361 ctattaaccagattcaaaactttataaatgaccttgacagcgcaaagtcacatatcacc 419
|||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 259 ctattaaccagattcaaaactttagaaatgaccttgacagtgcaaagtcacatatcacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
