Query= MSMg01no429_i10.b1 MSMg01no429_i10.b1 CHROMAT_FILE:
MSMg01no429_i10.b1 PHD_FILE: MSMg01no429_i10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:02 2005
(565 letters)
>mm_chr2_69769572_69770539
Length = 968
Score = 1007 bits (521), Expect = 0.0
Identities = 552/565 (97%), Gaps = 7/565 (1%)
Strand = Plus / Minus
Query: 4 ggaattctctgatttc--aatgcataaggcaaataaaccatttctcccctagtttaatgg 61
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ggaattctctga--tcagaatgcataaggcaaataaaccatttctcccctagtttaatgg 665
Query: 62 tcattgcatttatcacaggagaacaaagcaaaccaggacatacgaatatcacacatacaa 121
|||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||
Sbjct: 664 tcattgcatttatcacaggagaacgaagcaaaccaggacatatgaataccacacatacaa 605
Query: 122 aaagggagggatcaagttctgaaaaataagcataacatagtagaagctgaaactaaaatt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 aaagggagggatcaagttctgaaaaataagcataacatagtagaagctgaaactaaaatt 545
Query: 182 gtaaaaataagaatatgctttgggaaaagaaacacaagaatgcaggcaacttctgctcac 241
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 544 gtaaaaataagaatatgctttgggaaaagaaacacaagaatgcagccaacttctgctcac 485
Query: 242 ttgtgatgcacacatttgtgaaaaatcttatact---aatgaaatggattaattagggag 298
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 484 ttgtgatgcacacatttgtgaaaaatcttatactacaaatgaaatggattaattagggag 425
Query: 299 aataccaaggaacaagtccttcacaacccagtcaactttatagccaaagaagtatctaag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 aataccaaggaacaagtccttcacaacccagtcaactttatagccaaagaagtatctaag 365
Query: 359 cagtaactgatacctgggggtttaatttatatgccaggccaaaatcatggggtggtttag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cagtaactgatacctgggggtttaatttatatgccaggccaaaatcatggggtggtttag 305
Query: 419 gctgtctcagaggatgctgagactgtacaacagaatgagaaagctagttagcacagacag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gctgtctcagaggatgctgagactgtacaacagaatgagaaagctagttagcacagacag 245
Query: 479 tgtagaccccagggtccaagagatctgtaagaaccagatacggaggagagagaaagggag 538
|||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 244 tgtagaccccaggggccaagagatctgtgagaaccagatacggaggagagagaaagggag 185
Query: 539 ggaaggagaggggagcagaagagaa 563
|||||||||||||||||||||||||
Sbjct: 184 ggaaggagaggggagcagaagagaa 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 968
Length adjustment: 10
Effective length of query: 555
Effective length of database: 958
Effective search space: 531690
Effective search space used: 531690
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_i10.g1 MSMg01no429_i10.g1 CHROMAT_FILE:
MSMg01no429_i10.g1 PHD_FILE: MSMg01no429_i10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:03 2005
(415 letters)
>mm_chr2_69626309_69627123
Length = 815
Score = 679 bits (351), Expect = 0.0
Identities = 396/411 (96%)
Strand = Plus / Plus
Query: 5 gcagtttttccaagtggagcaattcagaaagaggctgagagaagccagtttgaatcagtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gcagtttttccaagtggagcaattcagaaagaggctgagagaagccagtttgaatcagtc 264
Query: 65 agcttgcagaggagtttgggccagaacacctgtgttgaaccatcgaggccagagttcaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agcttgcagaggagtttgggccagaacacctgtgttgaaccatcgaggccagagttcaga 324
Query: 125 aagaactagaaaggatgagcttattcagcagtaagcctctaaggcaacaattacatgggg 184
|||||||||||||| |||||||||||||||||||||||| ||| ||||| |||||| ||
Sbjct: 325 aagaactagaaagggtgagcttattcagcagtaagcctccaagacaacagttacatctgg 384
Query: 185 tgaataaaaattacttttacaatgtccttgtgtatgaatcaaatttcctaatgttcccac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgaataaaaattacttttacaatgtccttgtgtatgaatcaaatttcctaatgttcccac 444
Query: 245 tgattatattgtgtctatcctagggtgcagggtgggagtggggtgctattgctacagaac 304
||| | ||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 445 tgaccagattgtgtctatcctagggtgcagggtgggggtagggtgctattgctacagaac 504
Query: 305 tcaagcaaaacatgaagatagttcaaatttccaagaatctattagttaccatgaccacaa 364
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 505 tcaagcaaaacgtgaagatagttcaaatttccaagaatctattagttaccatgacaacaa 564
Query: 365 ttaaacttgtggaaagactttgtttttagaagttctatttgctcacatctt 415
||||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 565 ttaaacttgtggaaagactttgtttttagaagtcctacttgctcacatctt 615
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 415
Length of database: 815
Length adjustment: 9
Effective length of query: 406
Effective length of database: 806
Effective search space: 327236
Effective search space used: 327236
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
