MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-429I20
Chromosome	2 (Build37)
Map Location	69,447,011 - 69,447,513
singlet/doublet	singlet
Overlap gene	none
Upstream gene	4933409G03Rik, 4932414N04Rik, LOC667443, Lass6, Nostrin, Spc25, G6pc2, Abcb11, Dhrs9, Lrp2
Downstream gene	Bbs5, Kbtbd10, Fastkd1, Ppig, 4930578N16Rik, Phospho2, LOC433432, Klhl23, Ssb, Mettl5, 4930550G17Rik, Zfp650, Myo3b, LOC100040021, Sp5, 4933404M02Rik, LOC100040068, Gad1
Link	Open Mouse BAC browser

Click to get alignment info.

name	4933409G03Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:227998 MGI:3045336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4932414N04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75721 MGI:1922971
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667443 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667443
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Lass6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241447 MGI:2442564
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nostrin (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329416 MGI:3606242
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spc25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66442 MGI:1913692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	G6pc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14378 MGI:1277193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27413 MGI:1351619
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhrs9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:241452 MGI:2442798
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14725 MGI:95794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bbs5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72569 MGI:1919819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kbtbd10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228003 MGI:2683854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fastkd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320720 MGI:2444596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppig (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:228005 MGI:2445173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930578N16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75051 MGI:1923100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phospho2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73373 MGI:1920623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC433432 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433432
definition	note : RNA-binding protein 3-like pseudo : _no_value

name	Klhl23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:277396 MGI:2683536
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ssb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20823 MGI:98423
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mettl5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75422 MGI:1922672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930550G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75287 MGI:1922537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Zfp650 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68795 MGI:1916045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Myo3b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329421 MGI:2448580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040021 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040021
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 800 ESTs, 11 Proteins

name	Sp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:64406 MGI:1927715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933404M02Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66748 MGI:1913998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040068 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs

name	Gad1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14415 MGI:95632
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933409G03Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157495 GeneID:227998 MGI:3045336
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933409G03 gene transcript_id : NM_177651.3

name	4932414N04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803287 GeneID:75721 MGI:1922971
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4932414N04 gene transcript_id : NM_183113.2

name	Lass6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803392 GeneID:241447 MGI:2442564
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : longevity assurance homolog 6 (S. cerevisiae) transcript_id : NM_172856.2

name	Nostrin (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40556611 GeneID:329416 MGI:3606242
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nitric oxide synthase trafficker transcript_id : NM_181547.2

name	Spc25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387311 GeneID:66442 MGI:1913692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae) transcript_id : NM_025565.2

name	G6pc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802327 GeneID:14378 MGI:1277193
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glucose-6-phosphatase, catalytic, 2 transcript_id : NM_021331.3

name	Abcb11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:120432046 GeneID:27413 MGI:1351619
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 11 transcript_id : NM_021022.3

name	Dhrs9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342065 GeneID:241452 MGI:2442798
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dehydrogenase/reductase (SDR family) member 9 transcript_id : NM_175512.2

name	Lrp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487371 GeneID:14725 MGI:95794
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : low density lipoprotein receptor-related protein 2 transcript_id : NM_001081088.1

name	Bbs5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892752 GeneID:72569 MGI:1919819
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Bardet-Biedl syndrome 5 (human) transcript_id : NM_028284.2

name	Kbtbd10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487328 GeneID:228003 MGI:2683854
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch repeat and BTB (POZ) domain containing 10 transcript_id : NM_001081087.1

name	Fastkd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56710328 GeneID:320720 MGI:2444596
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FAST kinase domains 1 transcript_id : NM_177244.3

name	Ppig (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487332 GeneID:228005 MGI:2445173
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peptidyl-prolyl isomerase G (cyclophilin G) transcript_id : NM_001081086.1

name	4930578N16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118150477 GeneID:75051 MGI:1923100
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930578N16 gene transcript_id : NM_001077684.1

name	Phospho2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351352 GeneID:73373 MGI:1920623
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : phosphatase, orphan 2 transcript_id : NM_028521.2

name	Klhl23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142363720 GeneID:277396 MGI:2683536
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kelch-like 23 (Drosophila) transcript_id : NM_177784.3

name	Ssb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347456 GeneID:20823 MGI:98423
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Sjogren syndrome antigen B transcript_id : NM_009278.2

name	Mettl5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803077 GeneID:75422 MGI:1922672
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : methyltransferase like 5 transcript_id : NM_029280.2

name	Zfp650 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803398 GeneID:68795 MGI:1916045
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 650 transcript_id : NM_177783.3

name	Myo3b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111120333 GeneID:329421 MGI:2448580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myosin IIIB transcript_id : NM_177376.3

name	LOC100040021 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249820 GeneID:100040021
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 800 ESTs, 11 Proteins product : similar to ribosomal protein L9 transcript_id : XM_001474119.1

name	Sp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981231 GeneID:64406 MGI:1927715
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : trans-acting transcription factor 5 transcript_id : NM_022435.2

name	4933404M02Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124244076 GeneID:66748 MGI:1913998
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933404M02 gene transcript_id : NM_025744.2

name	LOC100040068 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149249822 GeneID:100040068
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 15 ESTs product : hypothetical protein LOC100040068 transcript_id : XM_001474218.1

name	Gad1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:88853821 GeneID:14415 MGI:95632
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamic acid decarboxylase 1 transcript_id : NM_008077.3

name	4933409G03Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244064 CCDS:CCDS16085.1 GeneID:227998 MGI:3045336
definition	codon_start : 1 product : hypothetical protein LOC227998 protein_id : NP_808319.1

name	4932414N04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147101 GeneID:75721 MGI:1922971
definition	codon_start : 1 product : hypothetical protein LOC75721 protein_id : NP_898936.1

name	Lass6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370296 CCDS:CCDS16086.1 GeneID:241447 MGI:2442564
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA] GO_process : GO:0008610 - lipid biosynthesis [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 product : longevity assurance homolog 6 protein_id : NP_766444.1

name	Nostrin (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40556612 CCDS:CCDS16087.1 GeneID:329416 MGI:3606242
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IDA] codon_start : 1 exception : mismatches in translation note : Dab2-interacting protein 2 product : nitric oxide synthase trafficker protein_id : NP_853525.2

name	Spc25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313454 CCDS:CCDS16088.1 GeneID:66442 MGI:1913692
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0007067 - mitosis [Evidence IEA] codon_start : 1 note : spindle pole body component 25 homolog product : spindle pole body component 25 protein_id : NP_079841.1

name	G6pc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946644 CCDS:CCDS16089.1 GeneID:14378 MGI:1277193
definition	GO_component : GO:0005789 - endoplasmic reticulum membrane [Evidence ISS] codon_start : 1 note : islet specific glucose-6-phosphatase; glucose-6-phosphatase, catalytic, related sequence; glucose-6-phosphate catalytic 2 product : glucose-6-phosphatase, catalytic, related protein_id : NP_067306.1

name	Abcb11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:120432047 CCDS:CCDS16090.1 GeneID:27413 MGI:1351619
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : bile salt export pump; sister of P-glycoprotein; ATP-binding cassette sub-family B (MDR/TAP) member 11 product : ATP-binding cassette, sub-family B, member 11 protein_id : NP_066302.2

name	Dhrs9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425272 CCDS:CCDS16091.1 GeneID:241452 MGI:2442798
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 note : epithelial retinol dehydrogenase product : NADP-dependent retinol dehydrogenase/reductase protein_id : NP_780721.1

name	Lrp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487372 GeneID:14725 MGI:95794
definition	GO_component : GO:0045177 - apical part of cell [Evidence IDA]; GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005903 - brush border [Evidence IDA]; GO:0005905 - coated pit [Evidence IDA]; GO:0030139 - endocytic vesicle [Evidence IDA]; GO:0005783 - endoplasmic reticulum [Evidence IDA]; GO:0005768 - endosome [Evidence IDA]; GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IDA]; GO:0004872 - receptor activity [Evidence ISS] [Evidence IEA]; GO:0005529 - sugar binding [Evidence IEA] GO_process : GO:0008283 - cell proliferation [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0006898 - receptor mediated endocytosis [Evidence IMP]; GO:0006766 - vitamin metabolism [Evidence IMP] codon_start : 1 note : glycoprotein 330 product : low density lipoprotein receptor-related protein 2 protein_id : NP_001074557.1

name	Bbs5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312250 CCDS:CCDS16094.1 GeneID:72569 MGI:1919819
definition	codon_start : 1 note : novel DUF1448 protein product : Bardet-Biedl syndrome 5 protein_id : NP_082560.1

name	Kbtbd10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487329 GeneID:228003 MGI:2683854
definition	codon_start : 1 product : kelch repeat and BTB (POZ) domain containing 10 protein_id : NP_001074556.1

name	Fastkd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56710329 CCDS:CCDS16096.1 GeneID:320720 MGI:2444596
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006118 - electron transport [Evidence IEA] codon_start : 1 note : novel protein containing a FAST kinase leucine-rich region product : FAST kinase domains 1 protein_id : NP_796218.2

name	Ppig (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487333 GeneID:228005 MGI:2445173
definition	GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA] codon_start : 1 product : peptidyl-prolyl isomerase G (cyclophilin G) protein_id : NP_001074555.1

name	4930578N16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118150478 GeneID:75051 MGI:1923100
definition	codon_start : 1 product : hypothetical protein LOC75051 protein_id : NP_001071152.1

name	Phospho2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312114 CCDS:CCDS16099.1 GeneID:73373 MGI:1920623
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016791 - phosphoric monoester hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : novel protein containing a putative phosphatase domain product : phosphatase, orphan 2 protein_id : NP_082797.1

name	Klhl23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244312 CCDS:CCDS16100.1 GeneID:277396 MGI:2683536
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : kelch-like 23 protein_id : NP_808452.1

name	Ssb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678143 CCDS:CCDS16101.1 GeneID:20823 MGI:98423
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006405 - RNA export from nucleus [Evidence IEA]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : La protein product : autoantigen La protein_id : NP_033304.1

name	Mettl5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110626062 CCDS:CCDS16103.1 GeneID:75422 MGI:1922672
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0008276 - protein methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006479 - protein amino acid methylation [Evidence IEA] codon_start : 1 product : methyltransferase like 5 protein_id : NP_083556.1

name	Zfp650 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244302 CCDS:CCDS16104.1 GeneID:68795 MGI:1916045
definition	GO_function : GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : zinc finger protein 650 isoform 2 protein_id : NP_808451.1

name	Myo3b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111120334 GeneID:329421 MGI:2448580
definition	codon_start : 1 note : myosin IIIB1; myosin IIIB2 product : myosin IIIB protein_id : NP_796350.2

name	LOC100040021 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249821 GeneID:100040021
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474169.1

name	Sp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11967967 CCDS:CCDS16106.1 GeneID:64406 MGI:1927715
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence ISS] [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : trans-acting transcription factor 5 protein_id : NP_071880.1

name	4933404M02Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124244077 GeneID:66748 MGI:1913998
definition	codon_start : 1 product : hypothetical protein LOC66748 protein_id : NP_080020.2

name	LOC100040068 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149249823 GeneID:100040068
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474268.1

name	Gad1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982847 CCDS:CCDS16108.1 GeneID:14415 MGI:95632
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA]; GO:0045202 - synapse [Evidence IDA] GO_function : GO:0016831 - carboxy-lyase activity [Evidence IEA]; GO:0004351 - glutamate decarboxylase activity [Evidence IEA]; GO:0016829 - lyase activity [Evidence IEA] GO_process : GO:0019752 - carboxylic acid metabolism [Evidence IEA]; GO:0042136 - neurotransmitter biosynthesis [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IEA] codon_start : 1 product : glutamic acid decarboxylase 1 protein_id : NP_032103.2

name	LOC667443 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667443
definition	number : 1 pseudo : _no_value

name	4930550G17Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94367025 GeneID:75287 MGI:1922537
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : RIKEN cDNA 4930550G17 gene transcript_id : XR_002332.1

clone name	MSMg01-164C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-412K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493D23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-361O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-150B10
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-261L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-331A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505O09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176O03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-167J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-071G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214F10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-497G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126O12
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-139B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-106P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-338G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210B14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018G08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-196F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123O23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208N22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-062K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-429I20.T7 (MSMg01no429_i20.b1)	MSMg01-429I20.TJ (MSMg01no429_i20.g1)
ACC	AG522253	AG522254
length	725	806
length of high quality (start - end)	507 (43 - 549)	159 (73 - 231)
definition	CHROMAT_FILE: MSMg01no429_i20.b1 PHD_FILE: MSMg01no429_i20.b1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:52:04 2005	CHROMAT_FILE: MSMg01no429_i20.g1 PHD_FILE: MSMg01no429_i20.g1.phd.1 CHEM: term DYE: big TIME: Wed May 18 18:52:05 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	TTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT TCTCCATATAATTGTTTGTGTACCCCTCCCAGCTCTGTGTCACTTCTTAA AACATAGTATATTTGACGTTTCCCACCTTCAATTATTTTAGGCACCTCAT CGTTATCTGTAAAGACACAGCTTTCAGGTATGTCTGATGGAAGTCCAAAT GAGTGAGATAAGGGCAGAATGTTTGAGATGTCAGTTTCTCCTTGAATGGA TGTCTAATACAGTAAATTCTTTAAGTGATGACAGAACCACGCCCCTACGG AGGTAGCAGCTTTATGAATCCTCACTAAGGCCCACGTGAAGCCAAATCTG TCATGAGCAGACACTAAGCACAAAGAGCTACTAGTTTGGGAAAGAGTCTG TCAAACCAGAACTTTGAATGGTGTTAAGTCCCACACATGTTCTTTAAGGA GCTGCCTAGTTCCAGTTGCACATAAGTGGCTGCTCCGTCTTGACATGCAG AGCTGAGATCTCAGAGTCTTTACTCCTTAGACAAAGGAGGAGAGGGCAGA CAATGTTCCTAGGCACTAAGGCATTGTGGCCTCCAGCTCCCGCTCTGGGT TCTGGATACTTTCTTTTTCCTTAACAAAGGCCGGAAGACATACACGAAGT TGGGAACAGACTGTCTATCCTAAGCCTGGGATGGAATCCAAGCTCAGCTC CCATCTGGGAAGCCAGGTTTTTGTN	TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXCTCCTGATCAGCTGATCTTTGCTGGTAA GCAGCTGGAAGATGGCCGGGCTTTGTCTGACTACACATTCCTAAGGAGTC CACCCTTCATCTGGTGTTGAGACTTCGGGTGGTGCTAAGAGAAGGAAGAA GTCTTACACCACTCCCAAGAAGAGTAAGCNNATAAGAAGGNAAAGAAAGG TCCTATAGTTGGTTGTGCTGNGAAATTACTTNNAANNNNNNNACNNCCTN NCCCTCTTTTTTTCCCCCCCCAAACNCCGGCCCCATAAAAACCCCACTTC TCTCCGGGAGGGGGGGGCCTTTTTTTTTTTTGGGGGGGGGGGGGGGGCGG TTTTCTTTTTTGGAGGTTCNTCCNTTTTTTNTNTTCTTGTCTTCCCTCCC TTTATCTCCTCCCCTTTCCTTCTCCTCCCCATCGCCCCCCCTTTTTTTCC CCCCTCTGCCTCCCTCTCCCATTTTTTCTCCTCTTTACTTATCCCCCCGT TTTCCCTCCCTCCTTCTCCCTTTTTTTTTTTTTTTTACTCCCCCCTTTCT TTGCTCTCGCTTTGCCTTTTTTTTTTTCCCCCCCCCCCCCCGCTTTTTTT TTTCTTTCCCCCCCCCCCCCCCCCNTTTTTCCTCGTTTTNCCTGTCTCAG GGAGATAGTTCTTCCAACCCTCTTTTTCCCCGCCTTCTCTCCTCTTCCCC CCCTCCTCTTTCCCCCTTCTTTCTCCTACCTTTTTTTTTTTTCCCGCCCC CCTTTT
quality values	Open. Hide. 8 8 8 8 10 15 24 30 13 13 7 7 10 10 11 23 24 26 24 28 39 41 22 21 11 11 12 14 18 10 14 9 9 9 10 23 28 25 25 30 32 33 33 47 47 43 29 23 22 28 32 33 33 33 22 22 11 14 12 12 12 22 24 37 39 40 40 48 48 48 50 57 59 59 57 57 59 42 37 30 30 24 37 59 59 59 57 59 57 57 54 54 54 54 57 57 57 57 59 59 42 42 36 36 36 42 48 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 54 54 47 57 48 50 47 47 47 51 57 68 68 68 68 68 68 68 68 68 57 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 59 57 57 57 52 52 52 57 57 57 57 57 52 52 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 59 59 57 59 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 68 62 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 68 68 68 68 68 68 62 62 62 57 57 57 57 57 57 57 57 59 57 59 59 59 59 59 57 57 68 68 68 68 68 68 68 59 59 59 59 44 38 32 13 13 13 24 32 43 57 57 59 59 68 68 57 57 57 57 59 52 52 57 57 57 57 57 68 68 68 57 59 57 57 57 59 59 68 68 57 57 57 57 57 57 52 52 52 52 57 57 54 54 54 57 57 48 48 48 57 57 57 57 57 59 59 59 59 59 59 59 59 68 68 59 59 59 59 59 59 59 59 59 68 59 59 59 57 59 57 54 54 54 57 54 50 48 48 48 57 59 59 59 57 57 68 68 68 54 57 57 57 54 57 57 59 59 59 48 47 47 43 43 43 43 43 43 43 43 39 39 39 39 37 34 34 37 37 47 47 47 41 41 41 32 31 39 36 39 39 34 34 32 35 35 39 47 48 48 48 48 48 43 43 43 43 43 43 37 35 35 39 40 43 43 43 43 43 46 43 43 43 43 41 43 43 34 34 28 28 20 31 31 30 27 13 13 13 22 22 26 21 14 14 14 21 21 25 32 30 33 33 28 25 27 28 20 20 12 9 8 9 9 11 15 26 24 30 24 29 31 30 30 32 25 25 25 25 13 13 18 18 18 18 15 17 17 18 17 31 19 21 14 19 15 15 18 17 10 10 10 10 10 15 20 23 19 17 17 14 12 19 14 14 15 16 21 11 11 11 15 19 23 34 18 18 10 11 10 10 11 19 19 15 18 12 8 8 10 8 9 11 13 10 11 19 31 20 19 19 21 12 8 8 8 8 8 8 8 16 14 17 14 14 10 8 8 8 8 8 8 8 8 15 10 10 11 12 11 11 10 11 11 10 10 7 6 6 8 9 8 8 10 6 6 6 8 8 6 8 8 8 8 8 8 8 10 8 8 9 14 14 15 19 14 14 8 8 6 6 8 8 13 10 11 9 9 9 10 10 11 12 12 12 12 15 8 8 8 8 9 9 10 12 10 9 9 9 12 11 8 6 6 3 0	Open. Hide. 9 9 9 9 8 7 7 9 9 14 16 29 27 37 34 39 39 37 37 37 39 34 34 37 34 31 23 23 8 6 6 6 7 7 8 9 9 9 16 13 28 21 24 26 26 31 36 31 36 36 33 33 33 33 37 25 27 15 8 8 8 8 8 8 12 23 17 20 22 22 30 31 47 59 57 57 53 47 36 37 37 42 47 47 47 47 47 47 47 53 59 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 57 41 43 43 59 57 57 57 68 57 57 57 57 57 57 57 68 44 42 22 17 17 40 40 57 57 57 57 57 59 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 68 68 68 68 57 57 43 42 42 46 46 54 54 54 48 57 48 57 57 57 57 59 59 59 59 59 59 57 57 57 57 57 57 59 59 59 59 59 68 68 68 53 53 53 50 59 59 59 59 48 57 57 57 57 53 53 50 57 50 50 59 59 50 50 47 47 44 25 25 3 0 0 3 14 15 19 9 9 7 7 3 0 3 11 17 11 11 12 11 11 12 15 19 11 10 7 6 6 15 19 8 7 6 6 8 8 13 24 16 15 3 0 3 8 8 13 9 9 9 10 9 3 0 0 3 3 0 0 0 0 0 0 0 3 3 0 0 3 23 3 0 0 3 10 8 11 10 9 9 12 9 10 7 9 9 9 9 10 19 19 8 6 6 8 6 3 0 3 6 8 8 8 8 8 8 8 8 8 10 10 9 10 20 16 11 8 8 8 8 8 8 8 8 9 9 10 10 6 6 6 6 6 6 12 13 12 10 12 12 10 10 11 17 22 16 19 19 18 18 14 13 10 10 11 10 11 23 30 30 30 24 16 12 10 8 8 10 8 8 8 8 10 11 9 9 8 8 8 11 8 8 9 8 8 8 8 8 8 8 3 0 3 9 3 0 3 9 9 9 21 3 0 3 0 3 8 7 6 6 6 8 8 8 8 8 8 10 8 8 8 8 8 8 6 6 8 10 10 10 10 16 23 37 30 30 18 24 15 12 12 8 8 9 9 9 10 10 12 12 13 8 8 8 6 6 6 8 9 9 9 19 12 12 10 8 8 8 9 11 9 9 9 13 11 9 8 8 6 6 8 10 9 8 10 16 16 18 14 12 7 7 7 9 17 19 20 19 16 10 10 8 8 11 13 12 13 6 6 8 6 6 6 6 8 11 10 10 13 10 10 8 11 8 8 8 8 9 11 11 12 16 9 6 8 8 8 8 8 10 12 11 11 12 10 9 9 9 13 13 14 12 9 9 12 17 14 9 9 10 8 10 13 12 11 19 11 10 10 9 11 8 8 8 8 8 8 8 8 8 8 8 8 10 8 8 8 8 9 9 9 18 17 10 10 13 12 15 19 26 26 32 37 41 41 37 37 37 23 17 8 8 6 6 7 11 10 16 32 32 24 24 10 10 8 8 8 10 10 12 17 20 22 18 18 10 10 10 10 21 27 35 35 23 21 3 0 3 13 9 9 9 8 6 8 8 6 7 8 11 3 0 3 8 6 6 8 6 8 8 11 9 9 9 8 8 8 8 6 6 6 10 6 6 6 13 8 8 8 8 10 8 8 8 13 10 14 16 16 13 10 7 6 6 6 10 10 8 8 9 9 9 13 8 7 7 8 8 21 23 25 28 28 12 16 15 15 12 8 8 8 8 10 12 14 26 12 14 10 10 17 13 12 9 9 12 12 7 6 6 6 7 11 12 10 10 12 16 14 22 18 19 19 19 8 8 8 8 8 8 9 11 11 8 10 12 14 14

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no429_i20.b1 MSMg01no429_i20.b1 CHROMAT_FILE:
MSMg01no429_i20.b1 PHD_FILE: MSMg01no429_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:04 2005
         (507 letters)



>mm_chr2_69446807_69447713
          Length = 907

 Score =  926 bits (479), Expect = 0.0
 Identities = 497/503 (98%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctccatataattgtttgtgtacccctcccagctctgtgtcacttcttaaaacata 64
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattctccatataattgtttgtgtacccctcccagctctgtgtcacttcttaaaacaga 264

                                                                       
Query: 65  gtatatttgacgtttcccaccttcaattattttaggcacctcatcgttatctgtaaagac 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtatatttgacgtttcccaccttcaattattttaggcacctcatcgttatctgtaaagac 324

                                                                       
Query: 125 acagctttcaggtatgtctgatggaagtccaaatgagtgagataagggcagaatgtttga 184
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acagctttcaggtatgtccgatggaagtccaaatgagtgagataagggcagaatgtttga 384

                                                                       
Query: 185 gatgtcagtttctccttgaatggatgtctaatacagtaaattctttaagtgatgacagaa 244
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gatgtcagtttctccttgagtggatgtctaatacagtaaattctttaagtgatgacagaa 444

                                                                       
Query: 245 ccacgcccctacggaggtagcagctttatgaatcctcactaaggcccacgtgaagccaaa 304
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 445 ccacgcccctacggaggtagcagctttaggaatcctcactaaggcccacgtgaagccaaa 504

                                                                       
Query: 305 tctgtcatgagcagacactaagcacaaagagctactagtttgggaaagagtctgtcaaac 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tctgtcatgagcagacactaagcacaaagagctactagtttgggaaagagtctgtcaaac 564

                                                                       
Query: 365 cagaactttgaatggtgttaagtcccacacatgttctttaaggagctgcctagttccagt 424
           |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 565 cagaactttgaatggtgttaagtcccacacgtgttctttaaggagctgcctggttccagt 624

                                                                       
Query: 425 tgcacataagtggctgctccgtcttgacatgcagagctgagatctcagagtctttactcc 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcacataagtggctgctccgtcttgacatgcagagctgagatctcagagtctttactcc 684

                                  
Query: 485 ttagacaaaggaggagagggcag 507
           |||||||||||||||||||||||
Sbjct: 685 ttagacaaaggaggagagggcag 707


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information