Query= MSMg01no429_o17.b1 MSMg01no429_o17.b1 CHROMAT_FILE:
MSMg01no429_o17.b1 PHD_FILE: MSMg01no429_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:32 2005
(459 letters)
>mm_chr2_127562402_127563260
Length = 859
Score = 797 bits (412), Expect = 0.0
Identities = 445/456 (97%), Gaps = 1/456 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcctatcttctgcctcccaactcaggagtactggcattatagatacatagtgg 63
|||||||||||| ||||||||||||||||||||||| ||||||||| |||| ||||||||
Sbjct: 793 ggaattctccta-cttctgcctcccaactcaggagtgctggcattacagatgcatagtgg 735
Query: 64 gtcctggggatctgaacccaggtccttacactttcctagcaagccctttaccaactgaac 123
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 734 gtcctggggatctgaacccaggtccttacactttcccagcaagccctttaccaactgaat 675
Query: 124 ggtttccccagcccctcttgtcactgctctcatattctacttgtctgcgggaggtcccta 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ggtttccccagctcctcttgtcactgctctcatattctacttgtctgcgggaggtcccta 615
Query: 184 tccctgggtgcttgagataatgttaaagggcagtgagtctcaggcttcagcgattctctg 243
|| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 614 tctctgggtgcttgagataatgttaaagggcagtgaatctcaggcttcagcgattctctg 555
Query: 244 gtccagtgtcctcctgtgaagtctgtgagtgagcattcccacacccagggcagccttgcc 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 554 gtccagtgtcctcctgtgaagtctgtgggtgagcattcccacacccagggcagccttgcc 495
Query: 304 tgcccatcttgggagcatcttggaaagccattatctctaccaaggaagaaaggaggcaaa 363
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tgcccatctcgggagcatcttggaaagccattatctctaccaaggaagaaaggaggcaaa 435
Query: 364 ggtgtcatcttcaagggaaggctttgtcagcctgcagtgtggtaggatatccgttgcagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ggtgtcatcttcaagggaaggctttgtcagcctgcagtgtggtaggatatccgttgcagg 375
Query: 424 gtccccacacttcctcttgtgtagagtattcccaag 459
||||||||||||||||||||||||||||||||||||
Sbjct: 374 gtccccacacttcctcttgtgtagagtattcccaag 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_o17.g1 MSMg01no429_o17.g1 CHROMAT_FILE:
MSMg01no429_o17.g1 PHD_FILE: MSMg01no429_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:32 2005
(471 letters)
>mm_chr2_127379111_127379981
Length = 871
Score = 828 bits (428), Expect = 0.0
Identities = 455/464 (98%)
Strand = Plus / Plus
Query: 1 ttgagcttccagagttggctcacggatttaggctcaaccaagtcagtctctaatatggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgagcttccagagttggctcacggatttaggctcaaccaagtcagtctctaatatggtt 260
Query: 61 ctttgtagatgggtgggtgtcacactccctggggtacccggtttacaggggtcttgctgg 120
||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 261 ctttgtagatgagtgtgtgtcacactccctggggtaccttgtttacaggggtcttgctgg 320
Query: 121 ggttccctttatgactctttctagcaaaggaaattctcaaggctaagccgcatctgctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggttccctttatgactctttctagcaaaggaaattctcaaggctaagccgcatctgctgc 380
Query: 181 atgatggtacatctccaggctctgcagtgtccggtcggtccaggccaatcacctgcctgt 240
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 381 atgatggtacatctccaggctctgcagtgtccggtgggtccaggccaatcacctgcctgt 440
Query: 241 tctggggtccaaattttcacttatgtgctgtctacatcattatgaaaaacactctgctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tctggggtccaaattttcacttatgtgctgtctacatcattatgaaaaacactctgctga 500
Query: 301 cacgtgataacaacatttcctattcaaaatacttcagggctactgtgtcctcacattaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacgtgataacaacatttcctattcaaaatacttcagggctactgtgtcctcacattaaa 560
Query: 361 gttctgcccctggcatagtggtccagatctgtgatcccagcatcaagggaggctgaggca 420
||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||
Sbjct: 561 gttctgcccctggcatagtggtccagatctgtgattccagcatcaagagacgctgaggca 620
Query: 421 ggaggataatgaattcatcctgagctacctagtgagactgtctg 464
||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 621 ggaggataatgtattcatcctgagctacctagtgagactgtctg 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
