Query= MSMg01no430_m19.b1 MSMg01no430_m19.b1 CHROMAT_FILE:
MSMg01no430_m19.b1 PHD_FILE: MSMg01no430_m19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:50 2005
(412 letters)
>mm_chr2_41452264_41453076
Length = 813
Score = 534 bits (276), Expect = e-156
Identities = 297/304 (97%), Gaps = 3/304 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttttc-tta-ctaagttttcagcactgaaataacttatatacaagtaacctt 62
||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gaattcatttttcaatatc-aagttttcagcactgaaataacttatatacaagtaacctt 321
Query: 63 atacaggtaacaacttttatatatgtaaacttatatgggcttgataggttatatctagat 122
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atacaggcaacaacttttatatatgtaaacttatatgggcttgataggttatatctagat 261
Query: 123 attttgagatatatgtcatatgaaaacaatgaatgaaataacttgagaatgagagaagta 182
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 260 attttgagatatatgtcatatgaaaacaatgaatgaaataacttgagaatgagagaggta 201
Query: 183 agatcaagaatcaacaaatgggacctcataaaattgcaaagcttctgtagggcaaaagat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 agatcaagaatcaacaaatgggacctcataaaattgcaaagcttctgtagggcaaaagat 141
Query: 243 actgtcaataagacaaaaaggccactaacagattggaaaagaatttttaccagcactact 302
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 140 actgtcaataagacaaaaaggccactaacagattgggaaagaatttttaccagcactact 81
Query: 303 ttct 306
||||
Sbjct: 80 ttct 77
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 813
Length adjustment: 9
Effective length of query: 403
Effective length of database: 804
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_m19.g1 MSMg01no430_m19.g1 CHROMAT_FILE:
MSMg01no430_m19.g1 PHD_FILE: MSMg01no430_m19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:53:50 2005
(418 letters)
>mm_chr2_41311767_41312585
Length = 819
Score = 741 bits (383), Expect = 0.0
Identities = 410/419 (97%), Gaps = 1/419 (0%)
Strand = Plus / Plus
Query: 1 atatactaaggaaatgcctctcccctaaaaggacaaatgagggacatttgtaagacatta 60
||||||||||||||||| |||||| |||||||||||| ||||||||||| ||||||||||
Sbjct: 201 atatactaaggaaatgcttctcccataaaaggacaaaggagggacatttctaagacatta 260
Query: 61 gcattcagttctacacagagtatatctagaataatcatatatattcaggtttatattttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcattcagttctacacagagtatatctagaataatcatatatattcaggtttatattttc 320
Query: 121 tccttgaagatgttcctttttaaaatatatcccaatactagtgattattaataaataatg 180
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccttgaatatattcctttttaaaatatatcccaatactagtgattattaataaataatg 380
Query: 181 gacaactaaaggctttgatactaaaaaaa-ttcaatcagtagaactatactattcgatta 239
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 gacaactaaaggctttgatactaaaaaaaattcaatcagtagaactatactattcgatta 440
Query: 240 gaatataaaacattttaattttaattaactagctacaaatatggaggaatatattacatt 299
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 gaatataaaacattttaattttaattaactagctacaaatatggatgaatatattacatt 500
Query: 300 gtaatatatattacaatgctagggatcaagagaaggacttcacacattgcctaccactct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaatatatattacaatgctagggatcaagagaaggacttcacacattgcctaccactct 560
Query: 360 gctacctagctctatccttaaagccccctccaattttttaaaagtaatttgatatttca 418
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 561 gctacctagctctatccttaaagctccctccaattttttaaaagtaatttgatatttca 619
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 819
Length adjustment: 9
Effective length of query: 409
Effective length of database: 810
Effective search space: 331290
Effective search space used: 331290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
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