Query= MSMg01no431_f16.b1 MSMg01no431_f16.b1 CHROMAT_FILE:
MSMg01no431_f16.b1 PHD_FILE: MSMg01no431_f16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:38 2005
(493 letters)
>mm_chr2_128625995_128626888
Length = 894
Score = 828 bits (428), Expect = 0.0
Identities = 434/436 (99%), Gaps = 1/436 (0%)
Strand = Plus / Minus
Query: 5 gaattccagttgttatgcttgttcagcaaatgctcttacctactaagccatctcagcagc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaattccagttgttatgcttgttcagcaaatgctcttacctactaagccatctcagcagc 377
Query: 65 cgctggtc-aaaaaaaaaattctgttgctaaaaatagaagaagcatttggcaattttatc 123
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cgctggtcaaaaaaaaaaattctgttgctaaaaatagaagaagcatttggcaattttatc 317
Query: 124 aacttttgcaaataaaatggatttaaagtccttttcttatataggcttggcaatcaaacc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aacttttgcaaataaaatggatttaaagtccttttcttatataggcttggcaatcaaacc 257
Query: 184 aatcatcttctctgtaaataaagttttattagaacacagctatgcctgtttgctgtctgt 243
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 256 aatcatcttctctgtaaataaagttttattagaacacagctatgcctatttgctgtctgt 197
Query: 244 gcttttgctatattgtaacactgagtggttgctacaaagggccctcaaagccataggctc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 gcttttgctatattgtaacactgagtggttgctacaaagggccctcaaagccataggctc 137
Query: 304 atctatgtgaatgcttagtctgcagttggtgaaactgtttgagaaggactaggaggtgtg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 atctatgtgaatgcttagtctgcagttggtgaaactgtttgagaaggactaggaggtgtg 77
Query: 364 gccttgatagaggaggtttcaaaacccacacccttttcagcctttctctctctgatttat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 gccttgatagaggaggtttcaaaacccacacccttttcagcctttctctctctgatttat 17
Query: 424 gcttgtgcatggtcat 439
||||||||||||||||
Sbjct: 16 gcttgtgcatggtcat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 894
Length adjustment: 10
Effective length of query: 483
Effective length of database: 884
Effective search space: 426972
Effective search space used: 426972
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_f16.g1 MSMg01no431_f16.g1 CHROMAT_FILE:
MSMg01no431_f16.g1 PHD_FILE: MSMg01no431_f16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:38 2005
(479 letters)
>mm_chr2_128437138_128438016
Length = 879
Score = 924 bits (478), Expect = 0.0
Identities = 478/478 (100%)
Strand = Plus / Plus
Query: 1 agtcctctctttcaagtcctcccatggcagccattaacaattgagagtgaaaaataactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcctctctttcaagtcctcccatggcagccattaacaattgagagtgaaaaataactt 260
Query: 61 ggacagtgggttcaatattgatacaaattgaatgttcatcaccaactgccatttaattgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacagtgggttcaatattgatacaaattgaatgttcatcaccaactgccatttaattgc 320
Query: 121 aatccctaatctaaaagtgaaggaaagcacattttgccctcaaggtcagccacaaattac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatccctaatctaaaagtgaaggaaagcacattttgccctcaaggtcagccacaaattac 380
Query: 181 cttgctgcaggcaggcaggcaggcagatggacattaccaaatcccaacgcagcaatttct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttgctgcaggcaggcaggcaggcagatggacattaccaaatcccaacgcagcaatttct 440
Query: 241 attggctttttcagaaacaagcgggaagttaacgagtaggcattctgcagttcctacttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attggctttttcagaaacaagcgggaagttaacgagtaggcattctgcagttcctacttg 500
Query: 301 tttacagtcacactggtctgagagaaagctgtgagcacaggttgaaatggagtgaaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttacagtcacactggtctgagagaaagctgtgagcacaggttgaaatggagtgaaagga 560
Query: 361 gtgttgttcctgttacatggggcatcatgagctgtcctgaaactcagaatgcaaaagcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgttgttcctgttacatggggcatcatgagctgtcctgaaactcagaatgcaaaagcac 620
Query: 421 tttccagacctttagttcagatagactgatttccgtatttcttaacactcctctgtgg 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttccagacctttagttcagatagactgatttccgtatttcttaacactcctctgtgg 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 479
Length of database: 879
Length adjustment: 10
Effective length of query: 469
Effective length of database: 869
Effective search space: 407561
Effective search space used: 407561
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
