Query= MSMg01no431_g05.b1 MSMg01no431_g05.b1 CHROMAT_FILE:
MSMg01no431_g05.b1 PHD_FILE: MSMg01no431_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:40 2005
(466 letters)
>mm_chr2_37621823_37622687
Length = 865
Score = 839 bits (434), Expect = 0.0
Identities = 455/462 (98%), Gaps = 1/462 (0%)
Strand = Plus / Minus
Query: 5 gaattcctgtgtctctcgccaaccatgtgcctagaaggagggttggctagacacagggtc 64
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaattcctgtgtcactagccaaccatgtgcctagaaggagggttggctagacacagggtc 606
Query: 65 tcatccaagaaagtcactttcgcttgatcccattatacagactgtaaaagcgaggccaga 124
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 605 tcatccaagaaagtcactttcgcttgatcccattatacaggctgtaaaagcgaggccaga 546
Query: 125 cactaattccattgccaggggaggcagcattaagtgaaggatcagaacataaactcgtgg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 cactaattccattgccaggggaggcagcattaagtgaaggatcagaacataaactcgtgg 486
Query: 185 tgcttggttcctcagcccaccctgggtcactcccttgttgggtctgtgaagtgatcagac 244
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 485 tgcttggttcctcagcccaccctgggtcactcccttgtcgggtctgtgaagtgatcagac 426
Query: 245 atggatagaggcaggatctgaggtggctccttgaagttttgcttgtcccaagagctcatg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atggatagaggcaggatctgaggtggctccttgaagttttgcttgtcccaagagctcatg 366
Query: 305 ggctctgtccccacagaagaaggaagcactgcaaacaaatcagcaccaggagagaaaagc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggctctgtccccacagaagaaggaagcactgcaaacaaatcagcaccaggagagaaaagc 306
Query: 365 ccaggtgctgagcacaccgtgccaggatggggaacctgagatgtctcgggcgagaggcac 424
|||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 305 ccaggtgctgagca-tccgtgccaggttggggaacctgagatgtctcgggcgagaggcac 247
Query: 425 acctgtacctcaggccgggaaccaatgggtggaagagtgggt 466
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 acctgtacctcaggccgggaaccaatgggtggaagagtgggt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 865
Length adjustment: 10
Effective length of query: 456
Effective length of database: 855
Effective search space: 389880
Effective search space used: 389880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_g05.g1 MSMg01no431_g05.g1 CHROMAT_FILE:
MSMg01no431_g05.g1 PHD_FILE: MSMg01no431_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:40 2005
(420 letters)
>mm_chr2_37434912_37435731
Length = 820
Score = 804 bits (416), Expect = 0.0
Identities = 419/420 (99%)
Strand = Plus / Plus
Query: 1 catcagaaaacttaagatacttgcactgatcatagcctctgttccctggtcccagaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catcagaaaacttaagatacttgcactgatcatagcctctgttccctggtcccagaaaaa 260
Query: 61 ggacctggcatcagcaggaacaggattacagtgcactgcacttctctgctctgctttgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacctggcatcagcaggaacaggattacagtgcactgcacttctctgctctgctttgta 320
Query: 121 cagcctttaacagaagccgacctcatgaactgcaggttctgtgtgagaacaaagtttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagcctttaacagaagccgacctcatgaactgcaggttctgtgtgagaacaaagtttcag 380
Query: 181 cagccttaatgctagagatgaacagaaactgctatagaaagaaatgtaaagcataaaatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagccttaatgctagagatgaacagaaactgctatagaaagaaatgtaaagcataaaatt 440
Query: 241 catttatacatacacacacacacatacagctttagcacttaacagctaacataataaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttatacatacacacacacacatacagctttagcacttaacagctaacataataaggt 500
Query: 301 gtatttgtggattaaggtttggcctaatactgatatcctataaatgaactctgttcatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatttgtggattaaggtttggcctaatactgatatcctataaatgaactctgttcatga 560
Query: 361 ctgaatacagtgagaaataatattctagcttcctaacttgagacagacagacagacggac 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 561 ctgaatacagtgagaaataatattctagcttcctaacttgagacagacagtcagacggac 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
