Query= MSMg01no432_b08.b1 MSMg01no432_b08.b1 CHROMAT_FILE:
MSMg01no432_b08.b1 PHD_FILE: MSMg01no432_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:40 2005
(536 letters)
>mm_chr2_81995758_81996692
Length = 935
Score = 1013 bits (524), Expect = 0.0
Identities = 530/532 (99%), Gaps = 1/532 (0%)
Strand = Plus / Minus
Query: 5 gaattccatgtgaattttaaactgtaaacttaaataatagagaggtttctgcagttccac 64
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gaattccatgt-aattttaaactgtaaacttaaataatagagaggtttctgcagttccac 677
Query: 65 gttatttttaactaacaaccacattatacacaaaaatatctcccttcttatcaaatgata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gttatttttaactaacaaccacattatacacaaaaatatctcccttcttatcaaatgata 617
Query: 125 ggctgtcagaagcaaatttgttctctctcttttttctttctatcctatactttactcttc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 ggctgtcagaagcaaatttgttctctctcttttttctttctatcctatactttactcttc 557
Query: 185 tcggatacctacaaaacacattcaaaggcagctgtcagatacctccgtttgaatacagaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tcggatacctacaaaacacattcaaaggcagctgtcagatacctccgtttgaatacagaa 497
Query: 245 aatgaaattgaatacaagaaagggaatatattaccttagtattttaagacataaaacttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aatgaaattgaatacaagaaagggaatatattaccttagtattttaagacataaaacttt 437
Query: 305 tttttcagaaatatggtaattgaaacacttgtgcaggttgaacaatacagactaaaaaat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tttttcagaaatatggtaattgaaacacttgtgcaggttgaacaatacagactaaaaaat 377
Query: 365 agggtagcttttatctctttacgcttattatcatgatgattgaaatgaatgtgcaaaact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 agggtagcttttatctctttacgcttattatcatgatgattgaaatgaatgtgcaaaact 317
Query: 425 gcttgtctgtatagttaggagccatatctgaaactaaacaattaaaaacaaaggttattt 484
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 316 gcttgtctgtatagttaggagccatatctgaaactaaacaattaaaaagaaaggttattt 257
Query: 485 ctttcaaaatgatatgtaaattagtacttagcatttatgccaacagggctgt 536
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 ctttcaaaatgatatgtaaattagtacttagcatttatgccaacagggctgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 935
Length adjustment: 10
Effective length of query: 526
Effective length of database: 925
Effective search space: 486550
Effective search space used: 486550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_b08.g1 MSMg01no432_b08.g1 CHROMAT_FILE:
MSMg01no432_b08.g1 PHD_FILE: MSMg01no432_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:40 2005
(413 letters)
>mm_chr2_81839896_81840708
Length = 813
Score = 768 bits (397), Expect = 0.0
Identities = 409/413 (99%)
Strand = Plus / Plus
Query: 1 acatggccaaaggtataattaaatagtacccaaacacattttagaaaagtgtatagaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 acatggccaaaggtataattaaatagtacccaaacacattttagaaaagtgtatagagga 260
Query: 61 cgtgagatgtattattattatttgtactacttttacaaaggtaatttgttcacaaattat 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cgtgagaggtattattattatttgtactacttttacaaaggtaatttgttcacaaattat 320
Query: 121 aaaaagaagtcagcacaaaataactattaattatgagagaaggagtaattgtacattttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaaagaagtcagcacaaaataactattaattatgagagaaggagtaattgtacattttc 380
Query: 181 ctgtagtattgttaatcatgtacattaacatcaatatgattcccatgaggttaaaaaaca 240
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 381 ctgtagtattgctaatcatgtacattaacatcagtatgattcccatgaggttaaaaaaca 440
Query: 241 taatttttaaagattggctatagagttccagggctaccacatactgtagtctggctaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taatttttaaagattggctatagagttccagggctaccacatactgtagtctggctaggt 500
Query: 301 taactaaaagaaatttagttttttcttggttctggagactgtaagtctaggttcagggtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taactaaaagaaatttagttttttcttggttctggagactgtaagtctaggttcagggtc 560
Query: 361 agaattggtttatagagaggccttttattttatttatttatttattttttagg 413
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaattggtttatagagaggccttttattttatttatttatttattttttagg 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 813
Length adjustment: 9
Effective length of query: 404
Effective length of database: 804
Effective search space: 324816
Effective search space used: 324816
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
