Query= MSMg01no433_m11.b1 MSMg01no433_m11.b1 CHROMAT_FILE:
MSMg01no433_m11.b1 PHD_FILE: MSMg01no433_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:58 2005
(258 letters)
>mm_chr2_73844629_73845285
Length = 657
Score = 412 bits (213), Expect = e-119
Identities = 248/261 (95%), Gaps = 8/261 (3%)
Strand = Plus / Plus
Query: 1 atttatatcttttttttttaaatttcttcttttcttttctccattcgtatgggattaatg 60
|||||||||||||||||||| |||||| ||||||||||| ||||||||| |||||||||
Sbjct: 201 atttatatctttttttttta--tttcttattttcttttctacattcgtataggattaatg 258
Query: 61 gagctaggtgaacagaagagtttcaaatggtcatcgtcactgtggaccttaggtttca-- 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gagctaggtgaacagaagagtttcaaatggtcatcgtcactgtggaccttaggtttcatc 318
Query: 119 agaaggtcacaagaagggagtcattgtcagcattctgtctaaggtc-tgccccagttacc 177
|| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 319 agt-ggtcacaagaagggagtcattgtcagcattctgtctaaggtcct-ccccagttacc 376
Query: 178 tggcaatagccaggtatgcctgattcactataaaagaggctgcttgccccctcctcgatc 237
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 377 tggcaacagccaggtatgcctgattcactataaaagaggctgcttgccccctcctcga-c 435
Query: 238 tcttgctctcttgctttctct 258
|||||||||||||||||||||
Sbjct: 436 tcttgctctcttgctttctct 456
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 657
Length adjustment: 9
Effective length of query: 249
Effective length of database: 648
Effective search space: 161352
Effective search space used: 161352
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no433_m11.g1 MSMg01no433_m11.g1 CHROMAT_FILE:
MSMg01no433_m11.g1 PHD_FILE: MSMg01no433_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:58 2005
(395 letters)
>mm_chr2_74030588_74031382
Length = 795
Score = 704 bits (364), Expect = 0.0
Identities = 388/396 (97%), Gaps = 2/396 (0%)
Strand = Plus / Minus
Query: 1 cctcctgtgagtagaaaccttctcttgcttctcttgttggacttcagttgagactgagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 cctcctgtgagtagaaaccttctcttgcttctcttgttggacttcagttgagactgagtt 536
Query: 61 tggcagagacatctaaagattcgaagtcttaaaagggat-ggggtggaggtgatgagact 119
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 535 tggcagagacatctaaagattcgaagtcttaaaagggataggggtggaggtgatgagact 476
Query: 120 gaagtaccatgatttcttcccaggagccttttcatgcctatgaaaaaacaatctcttcaa 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaagtaccatgatttcttcccaggagccttttcatgcctatgaaaaaacaatctcttcaa 416
Query: 180 tttcctcccgatcatcgggtccagacaccaagttgttaattggaggagtttaggccttat 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tttcctcccgatcatcgggtccagacaccaagttgttaattggaggagtttaggccttaa 356
Query: 240 tattctcttcccagtgcagcaaagagccagtcatttgacaggtccattaatggtaagaag 299
| || ||| ||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 355 cactc-ctttccagtgcagcaaagagccagttgtttgacaggtccattaatggtaagaag 297
Query: 300 ccagggagtctcccaaaacataatgctgtgatggatccaccagcccaccaagacacacat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ccagggagtctcccaaaacataatgctgtgatggatccaccagcccaccaagacacacat 237
Query: 360 gctgcagcagattttagaaggcaccttctcctgaag 395
||||||||||||||||||||||||||||||||||||
Sbjct: 236 gctgcagcagattttagaaggcaccttctcctgaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 395
Length of database: 795
Length adjustment: 9
Effective length of query: 386
Effective length of database: 786
Effective search space: 303396
Effective search space used: 303396
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
