Query= MSMg01no434_b10.b1 MSMg01no434_b10.b1 CHROMAT_FILE:
MSMg01no434_b10.b1 PHD_FILE: MSMg01no434_b10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:23 2005
(555 letters)
>mm_chr2_64725948_64726905
Length = 958
Score = 986 bits (510), Expect = 0.0
Identities = 541/554 (97%), Gaps = 7/554 (1%)
Strand = Plus / Plus
Query: 5 gaattctctggttgttcc-catgaagagttgggaagagatgatggagcagagctcaacag 63
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctggttgagccacatgaagagttgggaagagatgatggagcagagctcaacag 264
Query: 64 attgcctcaaaaataatgttttatttcaagttagacctggttttaaaaataagcagatcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attgcctcaaaaataatgttttatttcaagttagacctggttttaaaaataagcagatcc 324
Query: 124 aataacaaaacagactggagaaaactctagaaatagatctgcccatgaatgagaagtaga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aataacaaaacagactggagaaaactctagaaatagatctgcccatgaatgagaagtaga 384
Query: 184 actagggggtcagatgcaaaggaaattcagaaaaagcaaacaaaataggatttcataaca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actagggggtcagatgcaaaggaaattcagaaaaagcaaacaaaataggatttcataaca 444
Query: 244 tagcaattcatagtgcaattgaatatcgctaatcagaacagatcacaaatctataggtaa 303
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 445 tagcaattcatagtgcaattgaatatccctaatcagaacagatcacaaatctataggcaa 504
Query: 304 aatgaaaacctatcagacaccaccgccccccaaaaaaa--caacaaaatggaagatcatt 361
|||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 505 aatgaaaacctatcagacaccacccccccccaaaaaaaaccaacaaaatggaagatcatt 564
Query: 362 tgtaattgagttagggaaagatccatgaaagataaaattgaattgaaacctctcctagct 421
||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 565 tgtaattgagttaggga----tccgtgaaagataaaattgaattgaaacctctcctagct 620
Query: 422 aagaatttctgctcaaaagatacctaccatagaaagaatgaaaatacacagatggggtga 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagaatttctgctcaaaagatacctaccatagaaagaatgaaaatacacagatggggtga 680
Query: 482 aaatatttacaaatcacctttccgataaaagattttttttaagcccaaacatgagtaaat 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatatttacaaatcacctttccgataaaagattttttttaagcccaaacatgagtaaat 740
Query: 542 cttatatactctct 555
||||||||||||||
Sbjct: 741 cttatatactctct 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 958
Length adjustment: 10
Effective length of query: 545
Effective length of database: 948
Effective search space: 516660
Effective search space used: 516660
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_b10.g1 MSMg01no434_b10.g1 CHROMAT_FILE:
MSMg01no434_b10.g1 PHD_FILE: MSMg01no434_b10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:23 2005
(458 letters)
>mm_chr2_64867618_64868475
Length = 858
Score = 774 bits (400), Expect = 0.0
Identities = 442/459 (96%), Gaps = 7/459 (1%)
Strand = Plus / Minus
Query: 1 aaggagtgaatttcatctaaaactaagtcaatctttgacaaagaacaaaatgaaaaagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aaggagtgaatttcatctaaaactaagtcaatctttgacaaagaacaaaatgaaaaagtt 580
Query: 61 ttcctataattgctaataagatttgtttttaaaacttagcaatcaggacatgaagatatt 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 579 ttcctataattgctaataagatttgtttttaaaacttagcaatcaggatatgaagatatt 520
Query: 121 gacaaatttgacaactaagcaaatagaagaatagatctgtggatggataagcatttaaat 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 519 gacaaatttgacaactaagcaaatagaagaatagatttgtggatggataagcatttaaat 460
Query: 181 ttgaagtgaaagatgattcttccattgaatgtgactgtgactgcgttattggggaaaaaa 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 459 ttgaaatgaaagatgattcttccattgaatgtgactgtgactgcgttattggg-aaaaaa 401
Query: 241 aggagaagaaaatcttgctatattatctcatctttacaccaaaatgaaaaacaagac-aa 299
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| || ||
Sbjct: 400 aggagaagaaaatcttgccatattatctcatctttacaccaaaatgaaaaacaaaaccaa 341
Query: 300 aaatttacctgagtaaaatgtcatgttttaatgccaaagctaaacaatagatttctgaaa 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 340 aaatttacctgagtaaaatgtcatgttttaatgccagagctaaacaatagatttctgaaa 281
Query: 360 tatatgggtgattttttttatccaaatataaacaatataatcatgacatanactaatttg 419
||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 280 tatatgggtgaggttttttatccaaatataaacaatgtaatcatgacatagactaatttg 221
Query: 420 gctattatattttaaaacttctgtttaccatgagatacc 458
|||||||||||||||||||| ||||||||||||||
Sbjct: 220 gctattatattttaaaactt-----taccatgagatacc 187
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space: 379904
Effective search space used: 379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
