Query= MSMg01no434_c20.b1 MSMg01no434_c20.b1 CHROMAT_FILE:
MSMg01no434_c20.b1 PHD_FILE: MSMg01no434_c20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:30 2005
(252 letters)
>mm_chr2_56952438_56953089
Length = 652
Score = 449 bits (232), Expect = e-131
Identities = 244/248 (98%)
Strand = Plus / Plus
Query: 1 attcaaacctcttaaggaagaaataggctttttttatccttcctgccttttcaatgactt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 attcaaacctcttaaggaagaaataggctttttttatccttcctgctttttcaatgactt 260
Query: 61 tctctgagacataaaggtgggcagccatccttctattttcttgactaccaaagtagacaa 120
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 tctctgagacataaaggtgggcagccatcattctattttcttgactaccaaagtagacaa 320
Query: 121 ctatgaacccctttgttgtgaaaagcaatgaaaatcctctcatttaaaatgtcagagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctatgaacccctttgttgtgaaaagcaatgaaaatcctctcatttaaaatgtcagagaga 380
Query: 181 aggtggtagagatggcacatgctgcgatcccagtaggctgaggcagggggatcctgagtt 240
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 aggtgggagagatggcacatgctgcgatcccagtaggctgaggccgggggatcctgagtt 440
Query: 241 caagatca 248
||||||||
Sbjct: 441 caagatca 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no434_c20.g1 MSMg01no434_c20.g1 CHROMAT_FILE:
MSMg01no434_c20.g1 PHD_FILE: MSMg01no434_c20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:30 2005
(249 letters)
>mm_chr2_57135385_57136033
Length = 649
Score = 429 bits (222), Expect = e-125
Identities = 243/250 (97%), Gaps = 2/250 (0%)
Strand = Plus / Minus
Query: 1 ctcctcccttaagtctcctctgtcaagtaggcagcatgaaaagtgataagcacgcgctct 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 449 ctcctccc-taagtctcctctgtcaagtaggcagcatgaaaagtgataagcacacgctct 391
Query: 61 t-ccaggcactgagactggaccctgtgcaccctgaaggcgccgtagagcccatccggggc 119
| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 390 tcccaggcactgagactggaccctgcgcaccctgaaggcgccgtagagcccatccggggc 331
Query: 120 tgtgattcctttcagacgcgccacagagccctctgcaatcgattaccaaacttgggggta 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 tgtgattcctttcagacgcgccacagagccctctgcaatcgattaccaaacttgggggta 271
Query: 180 gtcgagcagaaggtcatgcagacccactttccgcgcaactgtcactttccgccatagttc 239
|||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||
Sbjct: 270 gtcgagcagaaggtcatgcagacccagtttccacgaaactgtcactttccgccatagttc 211
Query: 240 gcaattccat 249
||||||||||
Sbjct: 210 gcaattccat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 649
Length adjustment: 9
Effective length of query: 240
Effective length of database: 640
Effective search space: 153600
Effective search space used: 153600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
