Query= MSMg01no434_o12.b1 MSMg01no434_o12.b1 CHROMAT_FILE:
MSMg01no434_o12.b1 PHD_FILE: MSMg01no434_o12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:27 2005
(242 letters)
>mm_chr2_132307653_132308293
Length = 641
Score = 422 bits (218), Expect = e-122
Identities = 236/242 (97%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 1 ataattttaataccaaaggattatttcattcaaggcatctcttaatggttttttttatta 60
|||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||
Sbjct: 441 ataattttaataccaaaggattatttcattcaaggcatcttttaatgg-ttttttaatta 383
Query: 61 ttagatgctgaggatgataacaaatgttgtatcatgtcaaactgtatgtttcataaaata 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 382 ttagatgctgaggatgataacaaatgatgtatcatgtcaaactgtatgtttcataaaata 323
Query: 121 ttttgagctttgaaaatatcatttcaataaatcatggtaaataatgagaaaatggatctt 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttttgagctttgaaaagatcatttcaataaatcatggtaaataatgagaaaatggatctt 263
Query: 181 gctggagaccaaaatgaagtagaggtttattatgtaggaatggaggtaggacacaagtcc 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 262 gctggagaccaaaatgaagtagaggttcattatgtaggaatggaggtaggacacaagtcc 203
Query: 241 ca 242
||
Sbjct: 202 ca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 641
Length adjustment: 9
Effective length of query: 233
Effective length of database: 632
Effective search space: 147256
Effective search space used: 147256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no434_o12.g1 MSMg01no434_o12.g1 CHROMAT_FILE:
MSMg01no434_o12.g1 PHD_FILE: MSMg01no434_o12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:27 2005
(244 letters)
>mm_chr2_132189339_132189979
Length = 641
Score = 441 bits (228), Expect = e-128
Identities = 239/244 (97%), Gaps = 3/244 (1%)
Strand = Plus / Plus
Query: 1 tcctttgtgtctacttaatttgaagattttgtctcttcatagtttctgaaagatctcata 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcctctgtgtctacttaatttgaagattttgtctcttcatagtttctgaaagatctcata 260
Query: 61 gttcagttcatggctttaaaaacttattttctttgatacaattcctttaccttgtcttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttcagttcatggctttaaaaacttattttctttgatacaattcctttaccttgtcttga 320
Query: 121 agctccaacattctgtcttcctcatgacccattctattggtgaggttttccattgagttt 180
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 agctccaacattctgtcttcctcatgatccattctattggtgaggttttccattgagttt 380
Query: 181 tttttttttcattattatttgatttactgagtctttgatgtacagccttgtttcagtttg 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttttt---cattattatttgatttactgagtctttgatgtacagccttgtttcagtttg 437
Query: 241 gatt 244
||||
Sbjct: 438 gatt 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 641
Length adjustment: 9
Effective length of query: 235
Effective length of database: 632
Effective search space: 148520
Effective search space used: 148520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
