NGAGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCAGTGTATCACACTGTACTTCTGTGCATCACCCTATGAAGT
CGGGAACCTGGAGATGTAGGGCAAGTACTCAGGGAAGTCTCAGACTCCTT
GCCAATCCGGAATGTAAGTGGGCATTGATTTCACATCCGATTTACAGTGA
CACACGTCCGACCCACCTTCCTCTCTCCTCCCTTTCTCCTTGGAGCTGGG
GTTATCTTCCTGCCTTTGGCATTTCTTGCTACGTTTCCATATTGGCTCAG
TGTGAGATCAGAGATGCAGGATGTCTCTTGAATAAATCATCAGACTGAAG
TCATCACCTTGCCTTGTGTTCCAAAATCTTGCTCGTTGTATCTTCAAGTC
CTACTCAGACTCAGTGAGCTTTTGCTCAGTACTAGGTAAGATTAAATTAG
CACTCCATCACAGGGGCATCAATATTATAGGAGGTGGTTATGAAATAAAC
CGGTGTCCTGTGAGAGAAGTGTACCTTTGGACTAATTGCTCAGAATGTAA
TCACAGGCTATAAAATAATCCTTAAGTCATCGCTACTTTTGTAACTGTGA
AAAATCTGAAAATCACCTTGCCTGCGGAACGCCTGGCCCTTATTTGCCAA
ACAAGTGCGTCCATTGTCTTTTTATACATCGATCTGATGCCCTTGACCCC
CTTTTTTTTCTTCTCCTGCTATAACCCTTGATCTTAN

CCGCGATGATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXCTTCAGGAAAGACAAGAGTTGA
AAGATTGTTCAACAATCTATTGTAGAGATAAGGAAAGTGGGCCCAATGAA
AAAATCTATAAAACCAAGATGGAAAATATACAAGAGTGAGAGACCTTAGA
ACACACAGAAGGGATGTATCCATACAATCCTCCTCTCTCTATCATCTCTC
CACACTTTCCAGGNGCTCANGGGAACTCTGTNGGAAGTGAAGGTGGGGNA
AAAAGCTTAAGATCCAGAAAAATGGGGAAGCATGACAAGTTTCTGATGCA
CGAGTAGGGCCATAAAACCTCCAAAATTATAAGGAAAAGGGGAAAGGCCC
TCTTTAAACTGTTTTTTTTGTAAAAAAAAAAATGTGCGTTAATACATTTG
GGGGTGCGCCAAAAAAACAACCNTTGTGTGCTTTTTCCCCCCACAAAAAA
AAAAATATTCTTTTTTTTCTTCNNNNNNNNNNNNNNNNNCGGGTTGGGGN
NNAGGAATGGAGGNNNNNCCTGTCATGCTGGCCCTGGGGNNNNNNNNNNN
NNNNNTTGGGTTGCTACGTTNCGTAGGAGGNNNNNNNTGTGTTGGGNNNN
TAGGTTGGGGTTTTNNNNNTCTGAGAGAGNCNAGGGGGTTGTGGGTGTNN
NNACANNCCNCCCNNNNNNNNANNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNAACNANNNTGTAGG

Query= MSMg01no435_c04.b1 MSMg01no435_c04.b1 CHROMAT_FILE:
MSMg01no435_c04.b1 PHD_FILE: MSMg01no435_c04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:45 2005
         (458 letters)



>mm_chr2_68061771_68062628
          Length = 858

 Score =  857 bits (443), Expect = 0.0
 Identities = 452/455 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattccagtgtatcacactgtacttctgtgcatcaccctatgaagtcgggaacctgga 63
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 658 ggaattccagtgtatcacactgtacttctgtgcatcaacctatgaagtcgggaacctgga 599

                                                                       
Query: 64  gatgtagggcaagtactcagggaagtctcagactccttgccaatccggaatgtaagtggg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gatgtagggcaagtactcagggaagtctcagactccttgccaatccggaatgtaagtggg 539

                                                                       
Query: 124 cattgatttcacatccgatttacagtgacacacgtccgacccaccttcctctctcctccc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 cattgatttcacatccgatttacagtgacacacgtccgacccaccttcctctctcctccc 479

                                                                       
Query: 184 tttctccttggagctggggttatcttcctgcctttggcatttcttgctacgtttccatat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tttctccttggagctggggttatcttcctgcctttggcatttcttgctacgtttccatat 419

                                                                       
Query: 244 tggctcagtgtgagatcagagatgcaggatgtctcttgaataaatcatcagactgaagtc 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 tggctcagtgtgagatcagagatgcaggatgtctcttgaataaatcatcagactgaagtc 359

                                                                       
Query: 304 atcaccttgccttgtgttccaaaatcttgctcgttgtatcttcaagtcctactcagactc 363
           |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 358 atcaccttgccttgcgttccaaaatcttgctcgttgtatcttaaagtcctactcagactc 299

                                                                       
Query: 364 agtgagcttttgctcagtactaggtaagattaaattagcactccatcacaggggcatcaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 agtgagcttttgctcagtactaggtaagattaaattagcactccatcacaggggcatcaa 239

                                              
Query: 424 tattataggaggtggttatgaaataaaccggtgtc 458
           |||||||||||||||||||||||||||||||||||
Sbjct: 238 tattataggaggtggttatgaaataaaccggtgtc 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 858
Length adjustment: 10
Effective length of query: 448
Effective length of database: 848
Effective search space:   379904
Effective search space used:   379904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)