Query= MSMg01no435_d21.b1 MSMg01no435_d21.b1 CHROMAT_FILE:
MSMg01no435_d21.b1 PHD_FILE: MSMg01no435_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:54 2005
(382 letters)
>mm_chr2_125004085_125004865
Length = 781
Score = 669 bits (346), Expect = 0.0
Identities = 373/382 (97%), Gaps = 1/382 (0%)
Strand = Plus / Plus
Query: 1 acttggaagtgtcattgacaccaactgccagaaatcagagcagccccagctgttagccgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acttggaagtgtcattgacaccaactgccagaaatcagagcagccccagctgttagccgt 260
Query: 61 gtggaagccagctccatgcttctcagtgagcagagcgtgcatgtgtgcctctttcttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtggaagccagctccatgcttctcagtgagcagagcgtgcatgtgtgcctctttcttctg 320
Query: 121 ctcccaaggcaagctttgtatctacctgctgcctgaggccatacctcctcttggggccat 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 ctcccaaggcaagctttgtatctacctgctgcctgaggccacacctcctcttggggccat 380
Query: 181 tgcacactcatgcgcttactgggaaggagggagtatgctttccaataggcagagaagaaa 240
||||||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 381 tgcacactcgtgcgcttagtgggaaggagggagtgtgctttccaacaggcagagaagaaa 440
Query: 241 gcctcttcagtgcatagtgagaaatgcaggcccaggttagacaactagggaagcctgggg 300
|||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 441 gcctctccagtgcatagtgagaaatgcaggcccagcttagacaactagggaagc-tgggg 499
Query: 301 gccatgtgaccaaagagtaaactctagtagcctctgcttagtataagaaaaattgggaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 gccatgtgaccaaagagtaaactctagtagcctctgcttagtataagaaaacttgggaga 559
Query: 361 gtctgtgtatcttaaattggtt 382
||||||||||||||||||||||
Sbjct: 560 gtctgtgtatcttaaattggtt 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 781
Length adjustment: 9
Effective length of query: 373
Effective length of database: 772
Effective search space: 287956
Effective search space used: 287956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no435_d21.g1 MSMg01no435_d21.g1 CHROMAT_FILE:
MSMg01no435_d21.g1 PHD_FILE: MSMg01no435_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:54 2005
(344 letters)
>mm_chr2_125170092_125170835
Length = 744
Score = 590 bits (305), Expect = e-173
Identities = 329/337 (97%), Gaps = 2/337 (0%)
Strand = Plus / Minus
Query: 1 agctttatagaataataatgattagcaagaagtcaccatttcaaactagaataggaattt 60
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 536 agctttatagaataataatgattagcaagaagtcatcatttcaaactagaatgggaattt 477
Query: 61 gaacatatctgaatccacgtgcttttataaagccagggcaagggccaggcacagcaagac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 476 gaacatatctgaatccacgtgcttttataaagccagggcaagggccaggcacagcaaggc 417
Query: 121 tttgataatcatgaaagaacaagtctcatgctcttcaggatgatattatgggtgtgtcac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 416 tttgataatcatgaaagaacaagtctcatgctcttcaggatgatattatgggtgggtcac 357
Query: 181 ttcatttgcattctgaggcataacactggaagaaataattatgtaaatccttattgcttg 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 356 ttcatttgcattctgaggcataacactggaagaaattattatgtaaatccttattgcttg 297
Query: 241 atggggaagttataagatgctggaaaaaa-ttagacttggagggaaatcaagatattagc 299
|||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 296 atggagaagttataagatgctggaaaaaaattagacttggagggaaatcaagatattagc 237
Query: 300 atcacatgtgtgacacagaggagtaaaaaaatatcta 336
|||||||||||||||||||||||||||||| ||||||
Sbjct: 236 atcacatgtgtgacacagaggagtaaaaaa-tatcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
