TTCTAAATTGCGGCGCTATACGACTCACTATTTCCAAGGACCGCGGAATT
CTGGAATTACATCAGGAGGCTTAAGGNCCTGAATGCTTGACTCTTCCTTG
AAAGATCCAAGATCTTCTTGGCAATGTGGCCTGAGCTTCCTATCTTTGGG
CTTCCATTTTACTAAATATTGATGCCACAGTTACTGACTCTGAAGCAGTC
CCTTCCTGTATTGGTTATCTGTCTTCTCAGCAGGCCAGTTTCAGGATAGA
GGCTGTCCGAGTAGACACAGTGTCAGCCAAGACCAGCTCCCCACTCACAT
CCTAGCTAAGAAATAATGTACAAAGGACTAATGGGAACTTCAAATTGCAT
TGTGAGCTCTAGTGTTCTCTGAAAGTTAGAGACAATGTCAATCATTAAGG
TGATGTAAAGAATGGGCCAGTGTGCCTGCAGGTACTGCATGGGTACTTAA
GCAAAAGCCACTGTTGTATTTGATTTGTACTTATTTTGAGAAAGGATCTC
ACTATGAACCCTTGACTGGTCTGGAACTGGCAGAGATACACCTGCCTCTG
CTGGGACTAAAGGTACATGCCATGACACCTGCCTTGACACCTGCCTTGAC
ACCTGCCATGACACCTGCCTTGACACCTGCCATGACACCTGCCATGACAC
CTGCCATGACACCTGCCATGACACCTGCCATGACACCTGCCTTTAACACT
GTCATGACACCTGCCTTGACACCTGCCATGACAGCTGCCTTGACACCTGC
CAAGA

CAAGAAATTGGAATGCCTGGAGGGCGCCTGGTTCTCCCAAATTTAGGGGA
CACTATAGAATGTTCCCCCGAAATTCAGATGCCGAGCACACCCTTACAAA
GCAGTTCTCAGATGCCCATCCAGTACCTGTCTGTGGCTACGTTAGTAGTG
AAAAGACTCGGAAGGGAGGCTTTGCTACTGAAGGATGACGCTCTCCTTGC
GTCTCATTGCCGCTCTCCCCTCTCCCTGTAGGCTGATTGCGCTCACACTT
CCATTGGCTACATAGTCGTGCACGTGACTTGTGTTTGTCTCATGCTATCA
GATCCTTGCGCACCTAGATTTTTATTTTATAGGTTCAAATCTCGTGCCCA
TGATTGAGTGTTTTGCTTATGCGCATTGGCTGCACAATATGTGTGTGATG
CCTGTGAATATCATAACAGCATGCTGGATGCCTGGACCTCGATTTACCGA
TGACTGTTTTCTGTCCTGCGTCTGCTGCGAACTGGTCTTCCCCCCCCCTA
TAGTATCTGCCGATACCTCTACTCTCTGAACTCGCCACCCTTTTCCCCCC
ACCATTTTTTCCCCGAGTGTCAACCATCCATACCCTTCCCTTGTCAGAAT
TCCTTAATTAAATCCCTCCCTGTGTTTACCTTTCATTCCTTATGGCCACC
GGATAGTTCGCTCCATATATTTTTTCTCGTGTCTCTCCGTCAGTAATAGA
ATATTCTCTCACATTCCTTGCGTGCCCCACTCTTTGTATTTTATTCCGTA
TTTCTCTTTCCTACTCTCATCATCCTCCACTTATCCTG

Query= MSMg01no436_a19.b1 MSMg01no436_a19.b1 CHROMAT_FILE:
MSMg01no436_a19.b1 PHD_FILE: MSMg01no436_a19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:01 2005
         (587 letters)



>mm_chr2_169247113_169248100
          Length = 988

 Score = 1035 bits (535), Expect = 0.0
 Identities = 572/591 (96%), Gaps = 13/591 (2%)
 Strand = Plus / Minus

                                                                       
Query: 8   actcttccttgaaaga-tccaagatcttcttggcaatgtggcctgagcttcctatctttg 66
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 actcttccttgaaagactccaagatcttcttggcaatgtggcctgagcttcctatctttg 543

                                                                       
Query: 67  ggcttccattttactaaatattgatgccacagttactgactctgaagcagtcccttcctg 126
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 542 ggcttccattttactaaatattgatgccacagttaccgactctgaagcagtcccttcctg 483

                                                                       
Query: 127 tattggttatctgtcttctcagcaggccagtttcaggatagaggctgtccgagtagacac 186
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 tattggttatctgtcttctcagcaggccagtttcaggatagaggctgtccgagtagacac 423

                                                                       
Query: 187 agtgtcagccaagaccagctccccactcacatcctagctaagaaataatgtacaaaggac 246
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agtgtcagccaagaccagctccccactcacatcctagctaagaaataatgtacaaaggac 363

                                                                       
Query: 247 taatgggaacttcaaattgcattgtgagctctagtgttctctgaaagttagagacaatgt 306
           |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 362 taatgggaacttcaaattacattgtgagctctagtgttctctgaaagctagagacaatgt 303

                                                                       
Query: 307 caatcattaaggtgatgtaaagaatgggccagtgtgcctgcaggtactgcatgggtactt 366
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 302 caatcattaaggtgatgtaaagaatgggccagtgtgcctgcaagtactgcatgggtactt 243

                                                                       
Query: 367 aagcaaaagccactgttgtatttgatttgtacttattttgagaaaggatctcactatgaa 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 aagcaaaagccactgttgtatttgatttgtacttattttgagaaaggatctcactatgaa 183

                                                                       
Query: 427 cccttgactggtctggaactggcagagatacacctgcctctgctgggactaaaggtacat 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 cccttgactggtctggaactggcagagatacacctgcctctgctgggactaaaggtacat 123

                                                                       
Query: 487 gccatgacacctgcc-t-----------tgacacctgccttgacacctgccatgacacct 534
           ||||||||||||||| |           ||||||||||||||||||||||||||||||||
Sbjct: 122 gccatgacacctgccatgacacctgccatgacacctgccttgacacctgccatgacacct 63

                                                              
Query: 535 gccttgacacctgccatgacacctgccatgacacctgccatgacacctgcc 585
           ||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 62  gccttgacacctgccttgacacctgccttgacacctgccatgacacctgcc 12


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 988
Length adjustment: 10
Effective length of query: 577
Effective length of database: 978
Effective search space:   564306
Effective search space used:   564306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)