NCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCATCTCGATTCCCTTCAGTCTCATCCGGCAAAGCACTTGTGTGC
ATTTTGCTCATGCTCCAAGACTGTGGCAGGCTGACTTTAAAGATGACGGG
AAAGTTAATTTAGTGGACGACATCCAAGGCAGCACAGCGTGCAGGCTGTG
ATATGGTTCTCGTTTGCTGTGTTTGGCCAGGTTTCTAGTGAGGATGGCAA
TAATAAGCAGAGTGAAAAGGTTTGGAAAACTTGCAGCTTGCCTAGGAAGT
GAGTGTGTGTGAAACGGGACTGATGTATGGATGGCTACAGACGCGTCCAG
GGATGCTAAAAGAAGCTGAGGGTTCATAGTGGGTCAGTGGGAAAGGTTCC
CCGAGGAGATCTCAGGGCTGGGCTGGACCCTGCCCATCACTGCCATAAGG
GTGTGAAGATTTTTGTTGAGATGGAAGAGAGCACAGGGCCCCCTAGGAAA
CTGCTTTCTCCGAAGTTACTTTCCCATGTTCGGCCACCGAAACACTCCCG
AACTGTGGTCTAAAGGGCCTGGCTCCTGAGCAATGACATCTCAGACTGTC
TTTTGTCCTCTTCACGGACAACATATATTCATGGCTACCCATGTACAGCT
AACCCATGCTTACAACACACACGTTTCTACCCTCCGTAAACCAGAGACGC
ACTGAACGACCTTTGTGTGTCCCCACCCATGACAGTATGGCACAACCTTG
TTG

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCACACTAGACAGAGCTTGAGCATAGG
AGACCTCANAGCCCACCCACACAGTGACATACTTCCTCCAACACAGCTAA
ATCTACTCCAACAAGGCCACACCTCATAATAGTGCTACTCCCTATAGGCC
AAGCATTCAAACTCAAGAATCTACAGGGGCCAAACCTATTCAAACCACCA
CACACCTCATAGCATTGTGCAGTGTGAAGCTTGGGCCTGCTCTTCATCTT
TTCAAACTTGGGAGATATGGTGTCTAAATGGGACTAAAGCGTTGGCCTTG
GGGCCAGGATGCCTGGGTTCACAGTCTACTTTTTTACCGGTTTGTAACTT
TGAACAATCCTGTCTCCTGGTGTGTTAACTGGGGCTCAGGACAGCCTCCA
CCTCAGGGTTGCTTTGAGCCCAGAGCTTATGATAAGTTAGGGTCACAGGA
GAGTGGTTGACGTGCTGGGAGTTAAGCCCACATTTTACAGTGAATGTTCC
GCTCTGTTTATCAGACTGCTGCAACCACAACAATGTAACTTAAAATTATA
CAGATTAGGCAGGGGATAGCTTAGCTAGTAAAGGGACCTGAATTTGATTC
CCTCAGAACCCTTTTTTATTTGTTTACTTATTTGGATAAATATATATACT
TTCGAGAAAGGGCTTAACCTGTGAAACTCCGGCTCGTCCTGTAATATTCT
TTGTAA

Query= MSMg01no436_d14.g1 MSMg01no436_d14.g1 CHROMAT_FILE:
MSMg01no436_d14.g1 PHD_FILE: MSMg01no436_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:14 2005
         (503 letters)



>mm_chr2_29221888_29222790
          Length = 903

 Score =  936 bits (484), Expect = 0.0
 Identities = 498/503 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacactagacagagcttgagcataggagacctcanagcccacccacacagtgacatactt 60
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 cacactagacagagcttgagcataggagacctcaaagcccacccacacagtgacatactt 260

                                                                       
Query: 61  cctccaacacagctaaatctactccaacaaggccacacctcataatagtgctactcccta 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 cctccaacacagctaaatctactccaacaaggccacacctcataatagtgctactcccga 320

                                                                       
Query: 121 taggccaagcattcaaactcaagaatctacaggggccaaacctattcaaaccaccacaca 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggccaagcattcaaactcatgaatctacaggggccaaacctattcaaaccaccacaca 380

                                                                       
Query: 181 cctcatagcattgtgcagtgtgaagcttgggcctgctcttcatcttttcaaacttgggag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcatagcattgtgcagtgtgaagcttgggcctgctcttcatcttttcaaacttgggag 440

                                                                       
Query: 241 atatggtgtctaaatgggactaaagcgttggccttggggccaggatgcctgggttcacag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatggtgtctaaatgggactaaagcgttggccttggggccaggatgcctgggttcacag 500

                                                                       
Query: 301 tctacttttttaccggtttgtaactttgaacaatcctgtctcctggtgtgttaactgggg 360
           |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 tctactttttcaccggtttgtaactttgaacaatcctgtctcctggtgtgtaaactgggg 560

                                                                       
Query: 361 ctcaggacagcctccacctcagggttgctttgagcccagagcttatgataagttagggtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcaggacagcctccacctcagggttgctttgagcccagagcttatgataagttagggtc 620

                                                                       
Query: 421 acaggagagtggttgacgtgctgggagttaagcccacattttacagtgaatgttccgctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acaggagagtggttgacgtgctgggagttaagcccacattttacagtgaatgttccgctc 680

                                  
Query: 481 tgtttatcagactgctgcaacca 503
           |||||||||||||||||||||||
Sbjct: 681 tgtttatcagactgctgcaacca 703


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 903
Length adjustment: 10
Effective length of query: 493
Effective length of database: 893
Effective search space:   440249
Effective search space used:   440249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)